Introduction

In this section we will: * identify which Ingrown Toe Nail procedures were excluded and why * identify which different Ingrown Toe Nail subgroups were created and why

If you have questions or concerns about this data please contact Alexander Nielson ()

Load Libraries

Load Libraries

library(data.table)
library(tidyverse)
## Warning: replacing previous import 'vctrs::data_frame' by 'tibble::data_frame'
## when loading 'dplyr'
library(stringi)
library(ggridges)
library(broom)
library(disk.frame)
library(RecordLinkage)
library(googlesheets4)
library(bigrquery)
library(DBI)
devtools::install_github("utah-osa/hcctools2", upgrade="never" )
library(hcctools2)

Establish color palettes

cust_color_pal1 <- c(
        "Anesthesia" = "#f3476f",
        "Facility" = "#e86a33",
        "Medicine Proc" = "#e0a426",
        "Pathology" = "#77bf45",
        "Radiology" = "#617ff7",
        "Surgery" = "#a974ee"
    )

cust_color_pal2 <- c(
        "TRUE" = "#617ff7",
        "FALSE" = "#e0a426"
    )

cust_color_pal3 <- c(
        "above avg" = "#f3476f",
        "avg" = "#77bf45",
        "below avg" = "#a974ee"
    )



  fac_ref_regex <- "(UTAH)|(IHC)|(HOSP)|(HOSPITAL)|(CLINIC)|(ANESTH)|(SCOPY)|(SURG)|(LLC)|(ASSOC)|(MEDIC)|(CENTER)|(ASSOCIATES)|(U OF U)|(HEALTH)|(OLOGY)|(OSCOPY)|(FAMILY)|(VAMC)|(SLC)|(SALT LAKE)|(CITY)|(PROVO)|(OGDEN)|(ENDO )|( VALLEY)|( REGIONAL)|( CTR)|(GRANITE)|( INSTITUTE)|(INSTACARE)|(WASATCH)|(COUNTY)|(PEDIATRIC)|(CORP)|(CENTRAL)|(URGENT)|(CARE)|(UNIV)|(ODYSSEY)|(MOUNTAINSTAR)|( ORTHOPEDIC)|(INSTITUT)|(PARTNERSHIP)|(PHYSICIAN)|(CASTLEVIEW)|(CONSULTING)|(MAGEMENT)|(PRACTICE)|(EMERGENCY)|(SPECIALISTS)|(DIVISION)|(GUT WHISPERER)|(INTERMOUNTAIN)|(OBGYN)"

Connect to GCP database

bigrquery::bq_auth(path = 'D:/gcp_keys/healthcare-compare-prod-95b3b7349c32.json')

# set my project ID and dataset name
project_id <- 'healthcare-compare-prod'
dataset_name <- 'healthcare_compare'

con <- dbConnect(
  bigrquery::bigquery(),
  project = project_id,
  dataset = dataset_name,
  billing = project_id
)

Get NPI table

query <-  paste0("SELECT npi, clean_name, osa_group, osa_class, osa_specialization
                 FROM `healthcare-compare-prod.healthcare_compare.npi_full`")

#bq_project_query(billing, query) # uncomment to determine billing price for above query.

npi_full <- dbGetQuery(con, query) %>%
  data.table()

get a subset of the NPI providers based upon taxonomy groups

gs4_auth(email="alexnielson@utah.gov")
surgery <- read_sheet("https://docs.google.com/spreadsheets/d/1GY8lKwUJuPHtpUl4EOw9eriLUDG9KkNWrMbaSnA5hOU/edit#gid=0",
                    sheet="major_surgery") %>% as.data.table
## Auto-refreshing stale OAuth token.
## Reading from "Doctor Types to Keep"
## Range "'major_surgery'"
surgery <-  surgery[is.na(Remove) ] %>% .[["NUCC Classification"]]
  npi_prov_pair <-  npi_full[osa_class %in% surgery] %>%
    .[,.(npi=npi,
         clean_name = clean_name
         )
      ]

Load Data

bun_proc <-  disk.frame("full_apcd.df")
toe_nail2 <- bun_proc[proc_code_str_sorted %>% stri_detect_regex("11750")]
toe_nail2 %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2 %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 386 x 2
##    name                correlation
##    <chr>                     <dbl>
##  1 surg_bun_t_tum            0.461
##  2 anes_bun_t_anes           0.374
##  3 anes_bun_t_anesth         0.370
##  4 surg_bun_t_blood          0.337
##  5 surg_bun_t_vessel         0.337
##  6 radi_bun_t_elbow          0.337
##  7 faci_bun_t_care           0.337
##  8 faci_bun_t_hospital       0.337
##  9 faci_bun_t_initial        0.337
## 10 surg_bun_t_foot           0.333
## # ... with 376 more rows
cols_to_check <-  toe_nail2 %>% select_if(is.logical)
tag_frequency <- apply(cols_to_check, 2, function(i) sum(i > 0)) %>% enframe() %>% as.data.table() %>% .[,.(tag=name, freq=value)]
outlier_tag_list <- tag_frequency[freq < 2] %>% .[["tag"]]
toe_nail2_clean <- remove_bun_proc_with_rare_tags(outlier_tag_list=outlier_tag_list, df=toe_nail2)
## [1] "Start of rare tag removal"
## [1] "nrow:5537 , ncol:1404"
## [1] "nrow:5537"
## [1] "removing: surg_bun_t_a-grft"
## [1] 5536
## [1] "removing: surg_bun_t_abd"
## [1] 5536
## [1] "removing: surg_bun_t_abdom"
## [1] 5536
## [1] "removing: surg_bun_t_abdomen"
## [1] 5536
## [1] "removing: surg_bun_t_ablate"
## [1] 5536
## [1] "removing: surg_bun_t_abortion"
## [1] 5536
## [1] "removing: surg_bun_t_acell"
## [1] 5536
## [1] "removing: surg_bun_t_acellular"
## [1] 5536
## [1] "removing: surg_bun_t_acne"
## [1] 5536
## [1] "removing: surg_bun_t_acute"
## [1] 5536
## [1] "removing: surg_bun_t_adenoid"
## [1] 5536
## [1] "removing: surg_bun_t_adjust"
## [1] 5536
## [1] "removing: surg_bun_t_airway"
## [1] 5536
## [1] "removing: surg_bun_t_anal"
## [1] 5535
## [1] "removing: surg_bun_t_analysis"
## [1] 5535
## [1] "removing: surg_bun_t_aneurysm"
## [1] 5535
## [1] "removing: surg_bun_t_anoscopy"
## [1] 5535
## [1] "removing: surg_bun_t_antepartum"
## [1] 5535
## [1] "removing: surg_bun_t_aorta"
## [1] 5535
## [1] "removing: surg_bun_t_aortic"
## [1] 5535
## [1] "removing: surg_bun_t_aply"
## [1] 5535
## [1] "removing: surg_bun_t_appendectomy"
## [1] 5535
## [1] "removing: surg_bun_t_application"
## [1] 5535
## [1] "removing: surg_bun_t_apply"
## [1] 5535
## [1] "removing: surg_bun_t_approach"
## [1] 5535
## [1] "removing: surg_bun_t_arm"
## [1] 5534
## [1] "removing: surg_bun_t_arterial"
## [1] 5534
## [1] "removing: surg_bun_t_artery"
## [1] 5534
## [1] "removing: surg_bun_t_arthroplasty"
## [1] 5534
## [1] "removing: surg_bun_t_artificial"
## [1] 5534
## [1] "removing: surg_bun_t_augmentation"
## [1] 5534
## [1] "removing: surg_bun_t_autograft"
## [1] 5534
## [1] "removing: surg_bun_t_back"
## [1] 5534
## [1] "removing: surg_bun_t_balloon"
## [1] 5534
## [1] "removing: surg_bun_t_biceps"
## [1] 5534
## [1] "removing: surg_bun_t_bile"
## [1] 5534
## [1] "removing: surg_bun_t_bilobectomy"
## [1] 5534
## [1] "removing: surg_bun_t_bladder"
## [1] 5533
## [1] "removing: surg_bun_t_bleeding"
## [1] 5533
## [1] "removing: surg_bun_t_blockage"
## [1] 5533
## [1] "removing: surg_bun_t_blood"
## [1] 5532
## [1] "removing: surg_bun_t_bowel"
## [1] 5532
## [1] "removing: surg_bun_t_brace"
## [1] 5532
## [1] "removing: surg_bun_t_brain"
## [1] 5532
## [1] "removing: surg_bun_t_breast"
## [1] 5532
## [1] "removing: surg_bun_t_bronchial"
## [1] 5532
## [1] "removing: surg_bun_t_bronchoscopy"
## [1] 5532
## [1] "removing: surg_bun_t_brow"
## [1] 5532
## [1] "removing: surg_bun_t_bulge"
## [1] 5532
## [1] "removing: surg_bun_t_burn"
## [1] 5532
## [1] "removing: surg_bun_t_burr"
## [1] 5532
## [1] "removing: surg_bun_t_buttck"
## [1] 5532
## [1] "removing: surg_bun_t_buttock"
## [1] 5532
## [1] "removing: surg_bun_t_byp"
## [1] 5532
## [1] "removing: surg_bun_t_bypass"
## [1] 5532
## [1] "removing: surg_bun_t_cabg"
## [1] 5532
## [1] "removing: surg_bun_t_canal"
## [1] 5532
## [1] "removing: surg_bun_t_cannula"
## [1] 5532
## [1] "removing: surg_bun_t_capillary"
## [1] 5532
## [1] "removing: surg_bun_t_capsule"
## [1] 5532
## [1] "removing: surg_bun_t_care"
## [1] 5532
## [1] "removing: surg_bun_t_carotid"
## [1] 5532
## [1] "removing: surg_bun_t_cartilage"
## [1] 5532
## [1] "removing: surg_bun_t_cast"
## [1] 5532
## [1] "removing: surg_bun_t_cath"
## [1] 5532
## [1] "removing: surg_bun_t_cavity"
## [1] 5532
## [1] "removing: surg_bun_t_cell"
## [1] 5532
## [1] "removing: surg_bun_t_cervix"
## [1] 5532
## [1] "removing: surg_bun_t_cesarean"
## [1] 5532
## [1] "removing: surg_bun_t_chamber"
## [1] 5532
## [1] "removing: surg_bun_t_change"
## [1] 5532
## [1] "removing: surg_bun_t_chemical"
## [1] 5532
## [1] "removing: surg_bun_t_chemodenerv"
## [1] 5532
## [1] "removing: surg_bun_t_chest"
## [1] 5532
## [1] "removing: surg_bun_t_chin"
## [1] 5532
## [1] "removing: surg_bun_t_cholangiogram"
## [1] 5532
## [1] "removing: surg_bun_t_cholangiopancreatograph"
## [1] 5532
## [1] "removing: surg_bun_t_cholecystoenterostomy"
## [1] 5532
## [1] "removing: surg_bun_t_chronic"
## [1] 5532
## [1] "removing: surg_bun_t_circulation"
## [1] 5532
## [1] "removing: surg_bun_t_circumcision"
## [1] 5532
## [1] "removing: surg_bun_t_clamp"
## [1] 5532
## [1] "removing: surg_bun_t_clavicle"
## [1] 5532
## [1] "removing: surg_bun_t_clearance"
## [1] 5532
## [1] "removing: surg_bun_t_cleft"
## [1] 5532
## [1] "removing: surg_bun_t_clitoris"
## [1] 5532
## [1] "removing: surg_bun_t_cloacal"
## [1] 5532
## [1] "removing: surg_bun_t_closed"
## [1] 5532
## [1] "removing: surg_bun_t_closure"
## [1] 5531
## [1] "removing: surg_bun_t_clot"
## [1] 5531
## [1] "removing: surg_bun_t_collar"
## [1] 5531
## [1] "removing: surg_bun_t_colon"
## [1] 5530
## [1] "removing: surg_bun_t_colonoscopy"
## [1] 5530
## [1] "removing: surg_bun_t_coloproctostomy"
## [1] 5530
## [1] "removing: surg_bun_t_colostomy"
## [1] 5530
## [1] "removing: surg_bun_t_complex"
## [1] 5530
## [1] "removing: surg_bun_t_contriction"
## [1] 5530
## [1] "removing: surg_bun_t_control"
## [1] 5529
## [1] "removing: surg_bun_t_cord"
## [1] 5529
## [1] "removing: surg_bun_t_cornea"
## [1] 5529
## [1] "removing: surg_bun_t_coronary"
## [1] 5529
## [1] "removing: surg_bun_t_coronoid"
## [1] 5529
## [1] "removing: surg_bun_t_cranial"
## [1] 5529
## [1] "removing: surg_bun_t_craniofacial"
## [1] 5529
## [1] "removing: surg_bun_t_cryotherapy"
## [1] 5529
## [1] "removing: surg_bun_t_cuff"
## [1] 5529
## [1] "removing: surg_bun_t_cult"
## [1] 5529
## [1] "removing: surg_bun_t_cysto"
## [1] 5528
## [1] "removing: surg_bun_t_cystometrogram"
## [1] 5528
## [1] "removing: surg_bun_t_cystoscopy"
## [1] 5528
## [1] "removing: surg_bun_t_cystouretero"
## [1] 5528
## [1] "removing: surg_bun_t_deep"
## [1] 5528
## [1] "removing: surg_bun_t_defect"
## [1] 5528
## [1] "removing: surg_bun_t_defib"
## [1] 5528
## [1] "removing: surg_bun_t_degenerated"
## [1] 5528
## [1] "removing: surg_bun_t_delivery"
## [1] 5528
## [1] "removing: surg_bun_t_deplet"
## [1] 5528
## [1] "removing: surg_bun_t_dermabrasion"
## [1] 5528
## [1] "removing: surg_bun_t_design"
## [1] 5528
## [1] "removing: surg_bun_t_destroy"
## [1] 5528
## [1] "removing: surg_bun_t_destruction"
## [1] 5528
## [1] "removing: surg_bun_t_dialysis"
## [1] 5528
## [1] "removing: surg_bun_t_diaphragm"
## [1] 5528
## [1] "removing: surg_bun_t_dilat"
## [1] 5527
## [1] "removing: surg_bun_t_dilation"
## [1] 5527
## [1] "removing: surg_bun_t_disc"
## [1] 5527
## [1] "removing: surg_bun_t_diskectomy"
## [1] 5527
## [1] "removing: surg_bun_t_dissect"
## [1] 5527
## [1] "removing: surg_bun_t_donar"
## [1] 5527
## [1] "removing: surg_bun_t_donor"
## [1] 5527
## [1] "removing: surg_bun_t_draw"
## [1] 5527
## [1] "removing: surg_bun_t_dressing"
## [1] 5527
## [1] "removing: surg_bun_t_drill"
## [1] 5527
## [1] "removing: surg_bun_t_duoden"
## [1] 5527
## [1] "removing: surg_bun_t_ear"
## [1] 5527
## [1] "removing: surg_bun_t_ectopic"
## [1] 5527
## [1] "removing: surg_bun_t_elbow"
## [1] 5526
## [1] "removing: surg_bun_t_electrical"
## [1] 5526
## [1] "removing: surg_bun_t_electrode"
## [1] 5526
## [1] "removing: surg_bun_t_electroejaculation"
## [1] 5526
## [1] "removing: surg_bun_t_electrolysis"
## [1] 5526
## [1] "removing: surg_bun_t_embolize"
## [1] 5526
## [1] "removing: surg_bun_t_embryo"
## [1] 5526
## [1] "removing: surg_bun_t_endovas"
## [1] 5526
## [1] "removing: surg_bun_t_enlarge"
## [1] 5526
## [1] "removing: surg_bun_t_enterectomy"
## [1] 5526
## [1] "removing: surg_bun_t_epiderm"
## [1] 5526
## [1] "removing: surg_bun_t_epididymis"
## [1] 5526
## [1] "removing: surg_bun_t_epiphysis"
## [1] 5526
## [1] "removing: surg_bun_t_episiotomy"
## [1] 5526
## [1] "removing: surg_bun_t_esoph"
## [1] 5526
## [1] "removing: surg_bun_t_esophagoscopy"
## [1] 5526
## [1] "removing: surg_bun_t_esophagus"
## [1] 5526
## [1] "removing: surg_bun_t_exam"
## [1] 5526
## [1] "removing: surg_bun_t_excessive"
## [1] 5526
## [1] "removing: surg_bun_t_excise"
## [1] 5526
## [1] "removing: surg_bun_t_exostosis"
## [1] 5526
## [1] "removing: surg_bun_t_expander"
## [1] 5526
## [1] "removing: surg_bun_t_explora"
## [1] 5526
## [1] "removing: surg_bun_t_explore"
## [1] 5525
## [1] "removing: surg_bun_t_extra"
## [1] 5525
## [1] "removing: surg_bun_t_extremity"
## [1] 5525
## [1] "removing: surg_bun_t_eyelashes"
## [1] 5525
## [1] "removing: surg_bun_t_eyelid"
## [1] 5524
## [1] "removing: surg_bun_t_fallopian"
## [1] 5524
## [1] "removing: surg_bun_t_fat"
## [1] 5524
## [1] "removing: surg_bun_t_femur"
## [1] 5524
## [1] "removing: surg_bun_t_fibula"
## [1] 5524
## [1] "removing: surg_bun_t_fissure"
## [1] 5524
## [1] "removing: surg_bun_t_fistula"
## [1] 5524
## [1] "removing: surg_bun_t_fixation"
## [1] 5524
## [1] "removing: surg_bun_t_flap"
## [1] 5523
## [1] "removing: surg_bun_t_flow"
## [1] 5523
## [1] "removing: surg_bun_t_fluid"
## [1] 5522
## [1] "removing: surg_bun_t_fna"
## [1] 5522
## [1] "removing: surg_bun_t_follow-up"
## [1] 5522
## [1] "removing: surg_bun_t_forearm"
## [1] 5522
## [1] "removing: surg_bun_t_forehead"
## [1] 5522
## [1] "removing: surg_bun_t_free"
## [1] 5522
## [1] "removing: surg_bun_t_frontal"
## [1] 5522
## [1] "removing: surg_bun_t_fundoplasty"
## [1] 5522
## [1] "removing: surg_bun_t_gallbladder"
## [1] 5522
## [1] "removing: surg_bun_t_gastrointestinal"
## [1] 5522
## [1] "removing: surg_bun_t_gastrostomy"
## [1] 5522
## [1] "removing: surg_bun_t_gentialia"
## [1] 5522
## [1] "removing: surg_bun_t_gi"
## [1] 5522
## [1] "removing: surg_bun_t_gland"
## [1] 5522
## [1] "removing: surg_bun_t_glaucoma"
## [1] 5522
## [1] "removing: surg_bun_t_growth"
## [1] 5522
## [1] "removing: surg_bun_t_gum"
## [1] 5522
## [1] "removing: surg_bun_t_hair"
## [1] 5522
## [1] "removing: surg_bun_t_halo"
## [1] 5522
## [1] "removing: surg_bun_t_harvest"
## [1] 5522
## [1] "removing: surg_bun_t_head"
## [1] 5522
## [1] "removing: surg_bun_t_heart"
## [1] 5522
## [1] "removing: surg_bun_t_hematoma"
## [1] 5522
## [1] "removing: surg_bun_t_hemorrhoid"
## [1] 5521
## [1] "removing: surg_bun_t_hemorrhoidopexy"
## [1] 5521
## [1] "removing: surg_bun_t_hernia"
## [1] 5521
## [1] "removing: surg_bun_t_hip"
## [1] 5521
## [1] "removing: surg_bun_t_hole"
## [1] 5521
## [1] "removing: surg_bun_t_hormone"
## [1] 5521
## [1] "removing: surg_bun_t_humer"
## [1] 5521
## [1] "removing: surg_bun_t_hydrocele"
## [1] 5521
## [1] "removing: surg_bun_t_hyst"
## [1] 5521
## [1] "removing: surg_bun_t_hysterectomy"
## [1] 5521
## [1] "removing: surg_bun_t_iliopsoas"
## [1] 5521
## [1] "removing: surg_bun_t_illiac"
## [1] 5521
## [1] "removing: surg_bun_t_imag"
## [1] 5521
## [1] "removing: surg_bun_t_infect"
## [1] 5521
## [1] "removing: surg_bun_t_injection"
## [1] 5520
## [1] "removing: surg_bun_t_inner"
## [1] 5520
## [1] "removing: surg_bun_t_internal"
## [1] 5520
## [1] "removing: surg_bun_t_intestine"
## [1] 5520
## [1] "removing: surg_bun_t_intracorporeal"
## [1] 5520
## [1] "removing: surg_bun_t_intracranial"
## [1] 5520
## [1] "removing: surg_bun_t_intranasal"
## [1] 5520
## [1] "removing: surg_bun_t_inverted"
## [1] 5520
## [1] "removing: surg_bun_t_iris"
## [1] 5520
## [1] "removing: surg_bun_t_jaw"
## [1] 5520
## [1] "removing: surg_bun_t_kidney"
## [1] 5520
## [1] "removing: surg_bun_t_kneecap"
## [1] 5520
## [1] "removing: surg_bun_t_knuckle"
## [1] 5520
## [1] "removing: surg_bun_t_kyphectomy"
## [1] 5520
## [1] "removing: surg_bun_t_laceration"
## [1] 5520
## [1] "removing: surg_bun_t_laminotomy"
## [1] 5520
## [1] "removing: surg_bun_t_lap"
## [1] 5520
## [1] "removing: surg_bun_t_laparoscop"
## [1] 5520
## [1] "removing: surg_bun_t_large"
## [1] 5520
## [1] "removing: surg_bun_t_laryngoscopy"
## [1] 5520
## [1] "removing: surg_bun_t_larynx"
## [1] 5520
## [1] "removing: surg_bun_t_laser"
## [1] 5519
## [1] "removing: surg_bun_t_lavage"
## [1] 5519
## [1] "removing: surg_bun_t_lefort"
## [1] 5519
## [1] "removing: surg_bun_t_lengthen"
## [1] 5519
## [1] "removing: surg_bun_t_ligation"
## [1] 5519
## [1] "removing: surg_bun_t_lining"
## [1] 5519
## [1] "removing: surg_bun_t_lip"
## [1] 5519
## [1] "removing: surg_bun_t_lipectomy"
## [1] 5519
## [1] "removing: surg_bun_t_liver"
## [1] 5519
## [1] "removing: surg_bun_t_lobectomy"
## [1] 5519
## [1] "removing: surg_bun_t_long"
## [1] 5519
## [1] "removing: surg_bun_t_lumbar"
## [1] 5519
## [1] "removing: surg_bun_t_lung"
## [1] 5519
## [1] "removing: surg_bun_t_lymph"
## [1] 5519
## [1] "removing: surg_bun_t_major"
## [1] 5519
## [1] "removing: surg_bun_t_mandible"
## [1] 5519
## [1] "removing: surg_bun_t_marrow"
## [1] 5519
## [1] "removing: surg_bun_t_mast"
## [1] 5519
## [1] "removing: surg_bun_t_mastectomy"
## [1] 5519
## [1] "removing: surg_bun_t_mastoid"
## [1] 5519
## [1] "removing: surg_bun_t_material"
## [1] 5519
## [1] "removing: surg_bun_t_maxilla"
## [1] 5519
## [1] "removing: surg_bun_t_mcp"
## [1] 5519
## [1] "removing: surg_bun_t_mesh"
## [1] 5519
## [1] "removing: surg_bun_t_metacarpal"
## [1] 5519
## [1] "removing: surg_bun_t_microvasc"
## [1] 5519
## [1] "removing: surg_bun_t_middle"
## [1] 5519
## [1] "removing: surg_bun_t_midfoot"
## [1] 5519
## [1] "removing: surg_bun_t_mitral"
## [1] 5519
## [1] "removing: surg_bun_t_mohs"
## [1] 5519
## [1] "removing: surg_bun_t_mouth"
## [1] 5519
## [1] "removing: surg_bun_t_musc"
## [1] 5518
## [1] "removing: surg_bun_t_myelography"
## [1] 5518
## [1] "removing: surg_bun_t_myomectomy"
## [1] 5518
## [1] "removing: surg_bun_t_nasolacrimal"
## [1] 5518
## [1] "removing: surg_bun_t_neck"
## [1] 5518
## [1] "removing: surg_bun_t_needle"
## [1] 5518
## [1] "removing: surg_bun_t_nephrectomy"
## [1] 5518
## [1] "removing: surg_bun_t_neuroelectrode"
## [1] 5518
## [1] "removing: surg_bun_t_neuroendoscopy"
## [1] 5518
## [1] "removing: surg_bun_t_nipple"
## [1] 5518
## [1] "removing: surg_bun_t_node"
## [1] 5518
## [1] "removing: surg_bun_t_nodule"
## [1] 5518
## [1] "removing: surg_bun_t_nonfacial"
## [1] 5518
## [1] "removing: surg_bun_t_nose"
## [1] 5518
## [1] "removing: surg_bun_t_nosebleed"
## [1] 5518
## [1] "removing: surg_bun_t_nuero"
## [1] 5518
## [1] "removing: surg_bun_t_obstetrical"
## [1] 5518
## [1] "removing: surg_bun_t_oral"
## [1] 5518
## [1] "removing: surg_bun_t_orbitocranial"
## [1] 5518
## [1] "removing: surg_bun_t_orchiopexy"
## [1] 5518
## [1] "removing: surg_bun_t_ovarian"
## [1] 5518
## [1] "removing: surg_bun_t_ovary"
## [1] 5518
## [1] "removing: surg_bun_t_pacemaker"
## [1] 5518
## [1] "removing: surg_bun_t_pad"
## [1] 5518
## [1] "removing: surg_bun_t_palate"
## [1] 5518
## [1] "removing: surg_bun_t_palm"
## [1] 5518
## [1] "removing: surg_bun_t_palsy"
## [1] 5518
## [1] "removing: surg_bun_t_pancreas"
## [1] 5518
## [1] "removing: surg_bun_t_pancreatectomy"
## [1] 5518
## [1] "removing: surg_bun_t_pedcle"
## [1] 5518
## [1] "removing: surg_bun_t_pedicle"
## [1] 5518
## [1] "removing: surg_bun_t_peel"
## [1] 5518
## [1] "removing: surg_bun_t_pelvic"
## [1] 5518
## [1] "removing: surg_bun_t_pelvis"
## [1] 5518
## [1] "removing: surg_bun_t_penile"
## [1] 5518
## [1] "removing: surg_bun_t_penis"
## [1] 5517
## [1] "removing: surg_bun_t_percut"
## [1] 5517
## [1] "removing: surg_bun_t_percutaneous"
## [1] 5517
## [1] "removing: surg_bun_t_perineum"
## [1] 5517
## [1] "removing: surg_bun_t_pernineum"
## [1] 5517
## [1] "removing: surg_bun_t_pharynx"
## [1] 5517
## [1] "removing: surg_bun_t_pierce"
## [1] 5517
## [1] "removing: surg_bun_t_pilonidal"
## [1] 5517
## [1] "removing: surg_bun_t_place"
## [1] 5517
## [1] "removing: surg_bun_t_plastic"
## [1] 5517
## [1] "removing: surg_bun_t_pneumonectomy"
## [1] 5517
## [1] "removing: surg_bun_t_polyp"
## [1] 5517
## [1] "removing: surg_bun_t_pouch"
## [1] 5517
## [1] "removing: surg_bun_t_pregnancy"
## [1] 5517
## [1] "removing: surg_bun_t_prep"
## [1] 5517
## [1] "removing: surg_bun_t_prepare"
## [1] 5517
## [1] "removing: surg_bun_t_pressure"
## [1] 5516
## [1] "removing: surg_bun_t_process"
## [1] 5516
## [1] "removing: surg_bun_t_proctosigmoidoscopy"
## [1] 5516
## [1] "removing: surg_bun_t_prolapse"
## [1] 5516
## [1] "removing: surg_bun_t_prostat"
## [1] 5516
## [1] "removing: surg_bun_t_prostate"
## [1] 5516
## [1] "removing: surg_bun_t_prosthesis"
## [1] 5516
## [1] "removing: surg_bun_t_prosthetic"
## [1] 5516
## [1] "removing: surg_bun_t_pulmonary"
## [1] 5516
## [1] "removing: surg_bun_t_punch"
## [1] 5516
## [1] "removing: surg_bun_t_puncture"
## [1] 5516
## [1] "removing: surg_bun_t_pyeloplasty"
## [1] 5516
## [1] "removing: surg_bun_t_radius"
## [1] 5515
## [1] "removing: surg_bun_t_realignment"
## [1] 5515
## [1] "removing: surg_bun_t_rechannel"
## [1] 5515
## [1] "removing: surg_bun_t_reconstruct"
## [1] 5515
## [1] "removing: surg_bun_t_reconstruction"
## [1] 5515
## [1] "removing: surg_bun_t_rectal"
## [1] 5515
## [1] "removing: surg_bun_t_rectum"
## [1] 5515
## [1] "removing: surg_bun_t_reduction"
## [1] 5515
## [1] "removing: surg_bun_t_reinforce"
## [1] 5515
## [1] "removing: surg_bun_t_renal"
## [1] 5515
## [1] "removing: surg_bun_t_replantation"
## [1] 5515
## [1] "removing: surg_bun_t_reset"
## [1] 5515
## [1] "removing: surg_bun_t_retina"
## [1] 5514
## [1] "removing: surg_bun_t_retinopathy"
## [1] 5513
## [1] "removing: surg_bun_t_rib"
## [1] 5513
## [1] "removing: surg_bun_t_ridge"
## [1] 5513
## [1] "removing: surg_bun_t_ring"
## [1] 5513
## [1] "removing: surg_bun_t_roof"
## [1] 5513
## [1] "removing: surg_bun_t_rotator"
## [1] 5513
## [1] "removing: surg_bun_t_routine"
## [1] 5513
## [1] "removing: surg_bun_t_sacrum"
## [1] 5513
## [1] "removing: surg_bun_t_salivary"
## [1] 5513
## [1] "removing: surg_bun_t_scapula"
## [1] 5513
## [1] "removing: surg_bun_t_scar"
## [1] 5513
## [1] "removing: surg_bun_t_scope"
## [1] 5512
## [1] "removing: surg_bun_t_scrotum"
## [1] 5512
## [1] "removing: surg_bun_t_segment"
## [1] 5512
## [1] "removing: surg_bun_t_segmental"
## [1] 5512
## [1] "removing: surg_bun_t_segmentectomy"
## [1] 5512
## [1] "removing: surg_bun_t_septum"
## [1] 5511
## [1] "removing: surg_bun_t_sex"
## [1] 5511
## [1] "removing: surg_bun_t_shorten"
## [1] 5511
## [1] "removing: surg_bun_t_shoulder"
## [1] 5511
## [1] "removing: surg_bun_t_shunt"
## [1] 5511
## [1] "removing: surg_bun_t_sigmoidoscopy"
## [1] 5511
## [1] "removing: surg_bun_t_simple"
## [1] 5511
## [1] "removing: surg_bun_t_sinus"
## [1] 5511
## [1] "removing: surg_bun_t_skeletal"
## [1] 5511
## [1] "removing: surg_bun_t_skull"
## [1] 5511
## [1] "removing: surg_bun_t_sleeve"
## [1] 5511
## [1] "removing: surg_bun_t_slipped"
## [1] 5511
## [1] "removing: surg_bun_t_small"
## [1] 5511
## [1] "removing: surg_bun_t_socket"
## [1] 5511
## [1] "removing: surg_bun_t_soft"
## [1] 5511
## [1] "removing: surg_bun_t_sore"
## [1] 5511
## [1] "removing: surg_bun_t_sphenoid"
## [1] 5511
## [1] "removing: surg_bun_t_sphincter"
## [1] 5511
## [1] "removing: surg_bun_t_spine"
## [1] 5511
## [1] "removing: surg_bun_t_spleen"
## [1] 5511
## [1] "removing: surg_bun_t_splint"
## [1] 5511
## [1] "removing: surg_bun_t_split"
## [1] 5511
## [1] "removing: surg_bun_t_stem"
## [1] 5511
## [1] "removing: surg_bun_t_stenosis"
## [1] 5511
## [1] "removing: surg_bun_t_stent"
## [1] 5511
## [1] "removing: surg_bun_t_sternal"
## [1] 5511
## [1] "removing: surg_bun_t_sternum"
## [1] 5511
## [1] "removing: surg_bun_t_stimulation"
## [1] 5511
## [1] "removing: surg_bun_t_stomach"
## [1] 5511
## [1] "removing: surg_bun_t_stone"
## [1] 5511
## [1] "removing: surg_bun_t_stop"
## [1] 5511
## [1] "removing: surg_bun_t_strapping"
## [1] 5510
## [1] "removing: surg_bun_t_stricture"
## [1] 5510
## [1] "removing: surg_bun_t_styloid"
## [1] 5510
## [1] "removing: surg_bun_t_suction"
## [1] 5510
## [1] "removing: surg_bun_t_superficial"
## [1] 5510
## [1] "removing: surg_bun_t_suspension"
## [1] 5510
## [1] "removing: surg_bun_t_sutures"
## [1] 5510
## [1] "removing: surg_bun_t_sweat"
## [1] 5510
## [1] "removing: surg_bun_t_tags"
## [1] 5510
## [1] "removing: surg_bun_t_tail"
## [1] 5510
## [1] "removing: surg_bun_t_tear"
## [1] 5510
## [1] "removing: surg_bun_t_temporal"
## [1] 5510
## [1] "removing: surg_bun_t_testis"
## [1] 5510
## [1] "removing: surg_bun_t_therapy"
## [1] 5510
## [1] "removing: surg_bun_t_thigh"
## [1] 5510
## [1] "removing: surg_bun_t_thoracoscopy"
## [1] 5510
## [1] "removing: surg_bun_t_thoracotomy"
## [1] 5510
## [1] "removing: surg_bun_t_thorax"
## [1] 5510
## [1] "removing: surg_bun_t_throat"
## [1] 5510
## [1] "removing: surg_bun_t_thrombin"
## [1] 5510
## [1] "removing: surg_bun_t_thrombo"
## [1] 5510
## [1] "removing: surg_bun_t_thymus"
## [1] 5510
## [1] "removing: surg_bun_t_thyroid"
## [1] 5510
## [1] "removing: surg_bun_t_tkr"
## [1] 5510
## [1] "removing: surg_bun_t_tongue"
## [1] 5510
## [1] "removing: surg_bun_t_tonsil"
## [1] 5510
## [1] "removing: surg_bun_t_torsion"
## [1] 5510
## [1] "removing: surg_bun_t_total"
## [1] 5510
## [1] "removing: surg_bun_t_tract"
## [1] 5509
## [1] "removing: surg_bun_t_transcath"
## [1] 5509
## [1] "removing: surg_bun_t_transfer"
## [1] 5509
## [1] "removing: surg_bun_t_transform"
## [1] 5509
## [1] "removing: surg_bun_t_transplant"
## [1] 5508
## [1] "removing: surg_bun_t_triceps"
## [1] 5508
## [1] "removing: surg_bun_t_tricuspid"
## [1] 5508
## [1] "removing: surg_bun_t_trigger"
## [1] 5508
## [1] "removing: surg_bun_t_tube"
## [1] 5508
## [1] "removing: surg_bun_t_tumor"
## [1] 5508
## [1] "removing: surg_bun_t_tunneled"
## [1] 5508
## [1] "removing: surg_bun_t_ulcer"
## [1] 5508
## [1] "removing: surg_bun_t_ulna"
## [1] 5508
## [1] "removing: surg_bun_t_umbil"
## [1] 5508
## [1] "removing: surg_bun_t_unstable"
## [1] 5508
## [1] "removing: surg_bun_t_upper"
## [1] 5508
## [1] "removing: surg_bun_t_ureter"
## [1] 5508
## [1] "removing: surg_bun_t_urethra"
## [1] 5508
## [1] "removing: surg_bun_t_urethrovaginal"
## [1] 5508
## [1] "removing: surg_bun_t_uterus"
## [1] 5508
## [1] "removing: surg_bun_t_uvula"
## [1] 5508
## [1] "removing: surg_bun_t_vag"
## [1] 5507
## [1] "removing: surg_bun_t_vagotomy"
## [1] 5507
## [1] "removing: surg_bun_t_valve"
## [1] 5507
## [1] "removing: surg_bun_t_vascular"
## [1] 5507
## [1] "removing: surg_bun_t_vein"
## [1] 5507
## [1] "removing: surg_bun_t_venipuncture"
## [1] 5507
## [1] "removing: surg_bun_t_ventricular"
## [1] 5507
## [1] "removing: surg_bun_t_vertebra"
## [1] 5507
## [1] "removing: surg_bun_t_vessel"
## [1] 5507
## [1] "removing: surg_bun_t_vulva"
## [1] 5507
## [1] "removing: surg_bun_t_wall"
## [1] 5507
## [1] "removing: surg_bun_t_wax"
## [1] 5507
## [1] "removing: surg_bun_t_web"
## [1] 5507
## [1] "removing: surg_bun_t_wedge"
## [1] 5507
## [1] "removing: surg_bun_t_window"
## [1] 5507
## [1] "removing: surg_bun_t_windpipe"
## [1] 5507
## [1] "removing: surg_bun_t_wound"
## [1] 5507
## [1] "removing: surg_bun_t_wrinkle"
## [1] 5507
## [1] "removing: surg_bun_t_x-ray"
## [1] 5507
## [1] "removing: surg_bun_t_xenograft"
## [1] 5507
## [1] "removing: surg_bun_t_xenogrft"
## [1] 5507
## [1] "removing: surg_bun_t_xgraft"
## [1] 5507
## [1] "removing: medi_bun_t_applicat"
## [1] 5507
## [1] "removing: medi_bun_t_apply"
## [1] 5507
## [1] "removing: medi_bun_t_asses"
## [1] 5507
## [1] "removing: medi_bun_t_benzathine"
## [1] 5507
## [1] "removing: medi_bun_t_candida"
## [1] 5507
## [1] "removing: medi_bun_t_cast"
## [1] 5507
## [1] "removing: medi_bun_t_cathet"
## [1] 5507
## [1] "removing: medi_bun_t_catheterisation"
## [1] 5507
## [1] "removing: medi_bun_t_clostridium"
## [1] 5507
## [1] "removing: medi_bun_t_cochlear"
## [1] 5507
## [1] "removing: medi_bun_t_cold"
## [1] 5506
## [1] "removing: medi_bun_t_consult"
## [1] 5506
## [1] "removing: medi_bun_t_consultation"
## [1] 5506
## [1] "removing: medi_bun_t_crutch"
## [1] 5506
## [1] "removing: medi_bun_t_cyst"
## [1] 5506
## [1] "removing: medi_bun_t_derma"
## [1] 5506
## [1] "removing: medi_bun_t_dermal"
## [1] 5506
## [1] "removing: medi_bun_t_device"
## [1] 5506
## [1] "removing: medi_bun_t_dialys"
## [1] 5506
## [1] "removing: medi_bun_t_discharg"
## [1] 5506
## [1] "removing: medi_bun_t_drain"
## [1] 5506
## [1] "removing: medi_bun_t_draw"
## [1] 5506
## [1] "removing: medi_bun_t_dtap"
## [1] 5506
## [1] "removing: medi_bun_t_dtap-ipv"
## [1] 5506
## [1] "removing: medi_bun_t_endocrine"
## [1] 5506
## [1] "removing: medi_bun_t_epstein-barr"
## [1] 5506
## [1] "removing: medi_bun_t_equipment"
## [1] 5506
## [1] "removing: medi_bun_t_estradiol"
## [1] 5506
## [1] "removing: medi_bun_t_flu"
## [1] 5505
## [1] "removing: medi_bun_t_follow-up"
## [1] 5505
## [1] "removing: medi_bun_t_gastroenterology"
## [1] 5505
## [1] "removing: medi_bun_t_gonorrhoeae"
## [1] 5505
## [1] "removing: medi_bun_t_haloperidol"
## [1] 5505
## [1] "removing: medi_bun_t_hemorrhoid"
## [1] 5505
## [1] "removing: medi_bun_t_hepatitis"
## [1] 5504
## [1] "removing: medi_bun_t_hiv - 2"
## [1] 5504
## [1] "removing: medi_bun_t_hiv - 3"
## [1] 5504
## [1] "removing: medi_bun_t_home"
## [1] 5503
## [1] "removing: medi_bun_t_hormone"
## [1] 5503
## [1] "removing: medi_bun_t_hydration"
## [1] 5503
## [1] "removing: medi_bun_t_immunoassay"
## [1] 5503
## [1] "removing: medi_bun_t_immunohisto"
## [1] 5503
## [1] "removing: medi_bun_t_influenza"
## [1] 5503
## [1] "removing: medi_bun_t_insulin"
## [1] 5503
## [1] "removing: medi_bun_t_intrauterine"
## [1] 5503
## [1] "removing: medi_bun_t_iodine"
## [1] 5503
## [1] "removing: medi_bun_t_mental"
## [1] 5503
## [1] "removing: medi_bun_t_metabolic"
## [1] 5503
## [1] "removing: medi_bun_t_mgmt"
## [1] 5502
## [1] "removing: medi_bun_t_mmr"
## [1] 5501
## [1] "removing: medi_bun_t_monitor"
## [1] 5501
## [1] "removing: medi_bun_t_muscle"
## [1] 5501
## [1] "removing: medi_bun_t_needle"
## [1] 5501
## [1] "removing: medi_bun_t_non-invasive"
## [1] 5501
## [1] "removing: medi_bun_t_non-stress"
## [1] 5501
## [1] "removing: medi_bun_t_normal"
## [1] 5500
## [1] "removing: medi_bun_t_nursing"
## [1] 5500
## [1] "removing: medi_bun_t_nutrition"
## [1] 5499
## [1] "removing: medi_bun_t_observ"
## [1] 5499
## [1] "removing: medi_bun_t_outpatient"
## [1] 5499
## [1] "removing: medi_bun_t_pap"
## [1] 5498
## [1] "removing: medi_bun_t_physical"
## [1] 5498
## [1] "removing: medi_bun_t_portable"
## [1] 5498
## [1] "removing: medi_bun_t_pressure"
## [1] 5498
## [1] "removing: medi_bun_t_psychiat"
## [1] 5498
## [1] "removing: medi_bun_t_psycho"
## [1] 5497
## [1] "removing: medi_bun_t_pulmonary"
## [1] 5497
## [1] "removing: medi_bun_t_rabies"
## [1] 5497
## [1] "removing: medi_bun_t_radiation"
## [1] 5497
## [1] "removing: medi_bun_t_radio"
## [1] 5497
## [1] "removing: medi_bun_t_reeval"
## [1] 5497
## [1] "removing: medi_bun_t_rehab"
## [1] 5497
## [1] "removing: medi_bun_t_remove"
## [1] 5497
## [1] "removing: medi_bun_t_rheumatoid"
## [1] 5497
## [1] "removing: medi_bun_t_rubella"
## [1] 5497
## [1] "removing: medi_bun_t_saline"
## [1] 5497
## [1] "removing: medi_bun_t_sciatic"
## [1] 5497
## [1] "removing: medi_bun_t_serum"
## [1] 5497
## [1] "removing: medi_bun_t_shave"
## [1] 5497
## [1] "removing: medi_bun_t_simple"
## [1] 5497
## [1] "removing: medi_bun_t_sleep"
## [1] 5497
## [1] "removing: medi_bun_t_smear"
## [1] 5497
## [1] "removing: medi_bun_t_soft"
## [1] 5497
## [1] "removing: medi_bun_t_speech"
## [1] 5496
## [1] "removing: medi_bun_t_splint"
## [1] 5495
## [1] "removing: medi_bun_t_stent"
## [1] 5495
## [1] "removing: medi_bun_t_sterile"
## [1] 5494
## [1] "removing: medi_bun_t_stocking"
## [1] 5494
## [1] "removing: medi_bun_t_stone"
## [1] 5494
## [1] "removing: medi_bun_t_stool"
## [1] 5494
## [1] "removing: medi_bun_t_strep"
## [1] 5494
## [1] "removing: medi_bun_t_stress"
## [1] 5493
## [1] "removing: medi_bun_t_subseq"
## [1] 5493
## [1] "removing: medi_bun_t_substitute"
## [1] 5493
## [1] "removing: medi_bun_t_supplies"
## [1] 5493
## [1] "removing: medi_bun_t_suppls"
## [1] 5493
## [1] "removing: medi_bun_t_support"
## [1] 5493
## [1] "removing: medi_bun_t_susceptible"
## [1] 5493
## [1] "removing: medi_bun_t_swallow"
## [1] 5493
## [1] "removing: medi_bun_t_synth"
## [1] 5493
## [1] "removing: medi_bun_t_syphilis"
## [1] 5493
## [1] "removing: medi_bun_t_syringe"
## [1] 5493
## [1] "removing: medi_bun_t_system"
## [1] 5493
## [1] "removing: medi_bun_t_testing"
## [1] 5493
## [1] "removing: medi_bun_t_tests"
## [1] 5492
## [1] "removing: medi_bun_t_tetanus"
## [1] 5492
## [1] "removing: medi_bun_t_thyroxine"
## [1] 5492
## [1] "removing: medi_bun_t_tobacco"
## [1] 5492
## [1] "removing: medi_bun_t_toe"
## [1] 5492
## [1] "removing: medi_bun_t_tolerance"
## [1] 5492
## [1] "removing: medi_bun_t_topical"
## [1] 5492
## [1] "removing: medi_bun_t_toxin"
## [1] 5492
## [1] "removing: medi_bun_t_trach"
## [1] 5492
## [1] "removing: medi_bun_t_training"
## [1] 5491
## [1] "removing: medi_bun_t_transfusion"
## [1] 5491
## [1] "removing: medi_bun_t_treat"
## [1] 5490
## [1] "removing: medi_bun_t_typhoid"
## [1] 5490
## [1] "removing: medi_bun_t_urinalysis"
## [1] 5490
## [1] "removing: medi_bun_t_urinary"
## [1] 5490
## [1] "removing: medi_bun_t_urine"
## [1] 5490
## [1] "removing: medi_bun_t_uterine"
## [1] 5490
## [1] "removing: medi_bun_t_valve"
## [1] 5490
## [1] "removing: medi_bun_t_vein"
## [1] 5490
## [1] "removing: medi_bun_t_virus"
## [1] 5490
## [1] "removing: medi_bun_t_visual"
## [1] 5489
## [1] "removing: medi_bun_t_wbc"
## [1] 5489
## [1] "removing: medi_bun_t_wheelchair"
## [1] 5489
## [1] "removing: medi_bun_t_wheezing"
## [1] 5488
## [1] "removing: medi_bun_t_wire"
## [1] 5488
## [1] "removing: medi_bun_t_with"
## [1] 5487
## [1] "removing: medi_bun_t_without"
## [1] 5487
## [1] "removing: medi_bun_t_wkend"
## [1] 5487
## [1] "removing: medi_bun_t_hzv"
## [1] 5486
## [1] "removing: medi_bun_t_xgraft"
## [1] 5486
## [1] "removing: medi_bun_t_hepb"
## [1] 5486
## [1] "removing: medi_bun_t_ppsv23"
## [1] 5486
## [1] "removing: medi_bun_t_var_vaccine_live_subq"
## [1] 5485
## [1] "removing: radi_bun_t_abdom"
## [1] 5485
## [1] "removing: radi_bun_t_adrenal"
## [1] 5485
## [1] "removing: radi_bun_t_angiography"
## [1] 5485
## [1] "removing: radi_bun_t_aorta"
## [1] 5485
## [1] "removing: radi_bun_t_area"
## [1] 5485
## [1] "removing: radi_bun_t_arm"
## [1] 5485
## [1] "removing: radi_bun_t_artery"
## [1] 5485
## [1] "removing: radi_bun_t_bile"
## [1] 5485
## [1] "removing: radi_bun_t_bladder"
## [1] 5485
## [1] "removing: radi_bun_t_blade"
## [1] 5485
## [1] "removing: radi_bun_t_blockage"
## [1] 5485
## [1] "removing: radi_bun_t_body"
## [1] 5485
## [1] "removing: radi_bun_t_brain"
## [1] 5484
## [1] "removing: radi_bun_t_cardiac"
## [1] 5484
## [1] "removing: radi_bun_t_cast"
## [1] 5484
## [1] "removing: radi_bun_t_complex"
## [1] 5484
## [1] "removing: radi_bun_t_contrast"
## [1] 5484
## [1] "removing: radi_bun_t_cranial"
## [1] 5484
## [1] "removing: radi_bun_t_ct_scan"
## [1] 5484
## [1] "removing: radi_bun_t_delivery"
## [1] 5483
## [1] "removing: radi_bun_t_diagnostic"
## [1] 5483
## [1] "removing: radi_bun_t_dislocation"
## [1] 5483
## [1] "removing: radi_bun_t_duct"
## [1] 5483
## [1] "removing: radi_bun_t_elbow"
## [1] 5483
## [1] "removing: radi_bun_t_epidurograpy"
## [1] 5483
## [1] "removing: radi_bun_t_evaluation"
## [1] 5483
## [1] "removing: radi_bun_t_eye"
## [1] 5483
## [1] "removing: radi_bun_t_femur"
## [1] 5483
## [1] "removing: radi_bun_t_fetal"
## [1] 5483
## [1] "removing: radi_bun_t_fistula"
## [1] 5483
## [1] "removing: radi_bun_t_fmri"
## [1] 5483
## [1] "removing: radi_bun_t_forearm"
## [1] 5483
## [1] "removing: radi_bun_t_fracture"
## [1] 5483
## [1] "removing: radi_bun_t_gadobutrol"
## [1] 5483
## [1] "removing: radi_bun_t_gastric"
## [1] 5483
## [1] "removing: radi_bun_t_general"
## [1] 5483
## [1] "removing: radi_bun_t_gential"
## [1] 5483
## [1] "removing: radi_bun_t_gestation"
## [1] 5483
## [1] "removing: radi_bun_t_gi_tract"
## [1] 5483
## [1] "removing: radi_bun_t_glands"
## [1] 5483
## [1] "removing: radi_bun_t_heart"
## [1] 5483
## [1] "removing: radi_bun_t_heel"
## [1] 5482
## [1] "removing: radi_bun_t_humerus"
## [1] 5482
## [1] "removing: radi_bun_t_hyperthermia"
## [1] 5482
## [1] "removing: radi_bun_t_imag"
## [1] 5482
## [1] "removing: radi_bun_t_image"
## [1] 5482
## [1] "removing: radi_bun_t_imaging"
## [1] 5482
## [1] "removing: radi_bun_t_infant"
## [1] 5482
## [1] "removing: radi_bun_t_interpret"
## [1] 5482
## [1] "removing: radi_bun_t_jaw"
## [1] 5482
## [1] "removing: radi_bun_t_kidney"
## [1] 5482
## [1] "removing: radi_bun_t_leg"
## [1] 5482
## [1] "removing: radi_bun_t_lesion"
## [1] 5482
## [1] "removing: radi_bun_t_liver"
## [1] 5482
## [1] "removing: radi_bun_t_lower"
## [1] 5481
## [1] "removing: radi_bun_t_lung"
## [1] 5481
## [1] "removing: radi_bun_t_mammogra"
## [1] 5481
## [1] "removing: radi_bun_t_management"
## [1] 5481
## [1] "removing: radi_bun_t_marrow"
## [1] 5481
## [1] "removing: radi_bun_t_mastoids"
## [1] 5481
## [1] "removing: radi_bun_t_mra"
## [1] 5481
## [1] "removing: radi_bun_t_myelography"
## [1] 5481
## [1] "removing: radi_bun_t_nuclear"
## [1] 5481
## [1] "removing: radi_bun_t_oncology"
## [1] 5481
## [1] "removing: radi_bun_t_pancreas"
## [1] 5481
## [1] "removing: radi_bun_t_penis"
## [1] 5481
## [1] "removing: radi_bun_t_pet"
## [1] 5481
## [1] "removing: radi_bun_t_pituitary"
## [1] 5481
## [1] "removing: radi_bun_t_plan"
## [1] 5481
## [1] "removing: radi_bun_t_plasma"
## [1] 5481
## [1] "removing: radi_bun_t_radiation"
## [1] 5481
## [1] "removing: radi_bun_t_radio"
## [1] 5481
## [1] "removing: radi_bun_t_repair"
## [1] 5481
## [1] "removing: radi_bun_t_rib"
## [1] 5481
## [1] "removing: radi_bun_t_scan"
## [1] 5481
## [1] "removing: radi_bun_t_sinuses"
## [1] 5481
## [1] "removing: radi_bun_t_skull"
## [1] 5481
## [1] "removing: radi_bun_t_socket"
## [1] 5481
## [1] "removing: radi_bun_t_speech"
## [1] 5481
## [1] "removing: radi_bun_t_spleen"
## [1] 5481
## [1] "removing: radi_bun_t_tear"
## [1] 5481
## [1] "removing: radi_bun_t_teeth"
## [1] 5481
## [1] "removing: radi_bun_t_therapy"
## [1] 5481
## [1] "removing: radi_bun_t_thigh"
## [1] 5481
## [1] "removing: radi_bun_t_thorax"
## [1] 5481
## [1] "removing: radi_bun_t_throat"
## [1] 5481
## [1] "removing: radi_bun_t_thrombosis"
## [1] 5481
## [1] "removing: radi_bun_t_thyroid"
## [1] 5481
## [1] "removing: radi_bun_t_tract"
## [1] 5481
## [1] "removing: radi_bun_t_treatment"
## [1] 5481
## [1] "removing: radi_bun_t_trunk"
## [1] 5481
## [1] "removing: radi_bun_t_tumor"
## [1] 5481
## [1] "removing: radi_bun_t_upper"
## [1] 5481
## [1] "removing: radi_bun_t_urethra"
## [1] 5481
## [1] "removing: radi_bun_t_urinary"
## [1] 5481
## [1] "removing: radi_bun_t_vein"
## [1] 5481
## [1] "removing: radi_bun_t_ventilation"
## [1] 5481
## [1] "removing: radi_bun_t_veous"
## [1] 5481
## [1] "removing: radi_bun_t_vessel"
## [1] 5481
## [1] "removing: radi_bun_t_with_dye"
## [1] 5481
## [1] "removing: radi_bun_t_xray"
## [1] 5480
## [1] "removing: radi_bun_t_xtremity"
## [1] 5480
## [1] "removing: path_bun_t_acet"
## [1] 5479
## [1] "removing: path_bun_t_acute"
## [1] 5479
## [1] "removing: path_bun_t_alkaline"
## [1] 5479
## [1] "removing: path_bun_t_allerg"
## [1] 5479
## [1] "removing: path_bun_t_amikacin"
## [1] 5479
## [1] "removing: path_bun_t_amitripytline"
## [1] 5479
## [1] "removing: path_bun_t_ammonia"
## [1] 5479
## [1] "removing: path_bun_t_amniotic"
## [1] 5479
## [1] "removing: path_bun_t_anabolic"
## [1] 5479
## [1] "removing: path_bun_t_analgesics"
## [1] 5479
## [1] "removing: path_bun_t_analysis"
## [1] 5478
## [1] "removing: path_bun_t_antidepressant"
## [1] 5478
## [1] "removing: path_bun_t_antiepileptics"
## [1] 5478
## [1] "removing: path_bun_t_antipsychotic"
## [1] 5478
## [1] "removing: path_bun_t_aortic"
## [1] 5478
## [1] "removing: path_bun_t_autopsy"
## [1] 5478
## [1] "removing: path_bun_t_barbiturate"
## [1] 5478
## [1] "removing: path_bun_t_benzo"
## [1] 5478
## [1] "removing: path_bun_t_bile"
## [1] 5478
## [1] "removing: path_bun_t_bilirubin"
## [1] 5477
## [1] "removing: path_bun_t_biopsy"
## [1] 5477
## [1] "removing: path_bun_t_bleeding"
## [1] 5477
## [1] "removing: path_bun_t_cadmium"
## [1] 5477
## [1] "removing: path_bun_t_calcium"
## [1] 5477
## [1] "removing: path_bun_t_cannabinoids"
## [1] 5477
## [1] "removing: path_bun_t_carbamazepine"
## [1] 5477
## [1] "removing: path_bun_t_carbon"
## [1] 5477
## [1] "removing: path_bun_t_catecholamine"
## [1] 5477
## [1] "removing: path_bun_t_chlamydia"
## [1] 5477
## [1] "removing: path_bun_t_chloride"
## [1] 5477
## [1] "removing: path_bun_t_chromosome"
## [1] 5477
## [1] "removing: path_bun_t_chromotograph"
## [1] 5477
## [1] "removing: path_bun_t_class"
## [1] 5477
## [1] "removing: path_bun_t_clot"
## [1] 5477
## [1] "removing: path_bun_t_clozapine"
## [1] 5477
## [1] "removing: path_bun_t_coagulation"
## [1] 5477
## [1] "removing: path_bun_t_cocaine"
## [1] 5477
## [1] "removing: path_bun_t_cryopreservd"
## [1] 5477
## [1] "removing: path_bun_t_cyanide"
## [1] 5477
## [1] "removing: path_bun_t_cyclosporine"
## [1] 5477
## [1] "removing: path_bun_t_cystines"
## [1] 5477
## [1] "removing: path_bun_t_cytopathol"
## [1] 5477
## [1] "removing: path_bun_t_dehydroepiandrosterone"
## [1] 5477
## [1] "removing: path_bun_t_desipramine"
## [1] 5477
## [1] "removing: path_bun_t_digoxin"
## [1] 5477
## [1] "removing: path_bun_t_dihydro"
## [1] 5477
## [1] "removing: path_bun_t_dilation"
## [1] 5477
## [1] "removing: path_bun_t_dioxide"
## [1] 5477
## [1] "removing: path_bun_t_dipropylacetic"
## [1] 5477
## [1] "removing: path_bun_t_disease"
## [1] 5477
## [1] "removing: path_bun_t_draw"
## [1] 5477
## [1] "removing: path_bun_t_dysfunction"
## [1] 5477
## [1] "removing: path_bun_t_embryo"
## [1] 5477
## [1] "removing: path_bun_t_encephalitis"
## [1] 5477
## [1] "removing: path_bun_t_endocrine"
## [1] 5477
## [1] "removing: path_bun_t_epstein-barr"
## [1] 5477
## [1] "removing: path_bun_t_estrogen"
## [1] 5477
## [1] "removing: path_bun_t_ethanol"
## [1] 5477
## [1] "removing: path_bun_t_evaluation"
## [1] 5477
## [1] "removing: path_bun_t_fentanyl"
## [1] 5477
## [1] "removing: path_bun_t_fetal"
## [1] 5477
## [1] "removing: path_bun_t_fibrinogen"
## [1] 5477
## [1] "removing: path_bun_t_fibronlytic"
## [1] 5477
## [1] "removing: path_bun_t_flouride"
## [1] 5477
## [1] "removing: path_bun_t_galacto"
## [1] 5477
## [1] "removing: path_bun_t_gases"
## [1] 5477
## [1] "removing: path_bun_t_gastrin"
## [1] 5477
## [1] "removing: path_bun_t_genome"
## [1] 5477
## [1] "removing: path_bun_t_genotpying"
## [1] 5477
## [1] "removing: path_bun_t_glucagon"
## [1] 5477
## [1] "removing: path_bun_t_growth"
## [1] 5477
## [1] "removing: path_bun_t_gynecologic"
## [1] 5477
## [1] "removing: path_bun_t_haloperidol"
## [1] 5477
## [1] "removing: path_bun_t_hearing"
## [1] 5477
## [1] "removing: path_bun_t_heavy"
## [1] 5477
## [1] "removing: path_bun_t_heinz"
## [1] 5477
## [1] "removing: path_bun_t_hematocrit"
## [1] 5477
## [1] "removing: path_bun_t_heridatary"
## [1] 5477
## [1] "removing: path_bun_t_heroin"
## [1] 5477
## [1] "removing: path_bun_t_herpes"
## [1] 5477
## [1] "removing: path_bun_t_hold"
## [1] 5477
## [1] "removing: path_bun_t_hpa"
## [1] 5477
## [1] "removing: path_bun_t_hsv"
## [1] 5477
## [1] "removing: path_bun_t_imipramine"
## [1] 5477
## [1] "removing: path_bun_t_immunoassay"
## [1] 5477
## [1] "removing: path_bun_t_influenza"
## [1] 5476
## [1] "removing: path_bun_t_insulin"
## [1] 5475
## [1] "removing: path_bun_t_iodine"
## [1] 5475
## [1] "removing: path_bun_t_lab"
## [1] 5475
## [1] "removing: path_bun_t_lamotrigine"
## [1] 5475
## [1] "removing: path_bun_t_levetiracetam"
## [1] 5475
## [1] "removing: path_bun_t_lidocaine"
## [1] 5475
## [1] "removing: path_bun_t_lithium"
## [1] 5475
## [1] "removing: path_bun_t_loss"
## [1] 5475
## [1] "removing: path_bun_t_low"
## [1] 5475
## [1] "removing: path_bun_t_lung"
## [1] 5475
## [1] "removing: path_bun_t_lyme"
## [1] 5475
## [1] "removing: path_bun_t_lympg"
## [1] 5475
## [1] "removing: path_bun_t_malaria"
## [1] 5475
## [1] "removing: path_bun_t_mercury"
## [1] 5475
## [1] "removing: path_bun_t_metal"
## [1] 5475
## [1] "removing: path_bun_t_microscop"
## [1] 5474
## [1] "removing: path_bun_t_microscopic"
## [1] 5474
## [1] "removing: path_bun_t_microscopy"
## [1] 5474
## [1] "removing: path_bun_t_mitocondrial"
## [1] 5474
## [1] "removing: path_bun_t_mopath"
## [1] 5474
## [1] "removing: path_bun_t_mumps"
## [1] 5474
## [1] "removing: path_bun_t_mycophenolate"
## [1] 5474
## [1] "removing: path_bun_t_nicotine"
## [1] 5474
## [1] "removing: path_bun_t_nile"
## [1] 5474
## [1] "removing: path_bun_t_non-opioid"
## [1] 5474
## [1] "removing: path_bun_t_nonantibody"
## [1] 5474
## [1] "removing: path_bun_t_nucleic"
## [1] 5474
## [1] "removing: path_bun_t_obstretric"
## [1] 5474
## [1] "removing: path_bun_t_occult"
## [1] 5474
## [1] "removing: path_bun_t_onco"
## [1] 5474
## [1] "removing: path_bun_t_oocyte"
## [1] 5474
## [1] "removing: path_bun_t_opioid"
## [1] 5474
## [1] "removing: path_bun_t_ovulation"
## [1] 5474
## [1] "removing: path_bun_t_oxycodone"
## [1] 5474
## [1] "removing: path_bun_t_paper"
## [1] 5474
## [1] "removing: path_bun_t_period"
## [1] 5474
## [1] "removing: path_bun_t_phenobarbital"
## [1] 5474
## [1] "removing: path_bun_t_phenytoin"
## [1] 5474
## [1] "removing: path_bun_t_phosphatase"
## [1] 5474
## [1] "removing: path_bun_t_pituitary"
## [1] 5474
## [1] "removing: path_bun_t_plasminogen"
## [1] 5474
## [1] "removing: path_bun_t_poliovirus"
## [1] 5474
## [1] "removing: path_bun_t_pregabalin"
## [1] 5474
## [1] "removing: path_bun_t_primidone"
## [1] 5474
## [1] "removing: path_bun_t_procainamide"
## [1] 5474
## [1] "removing: path_bun_t_procedure"
## [1] 5474
## [1] "removing: path_bun_t_prophobulinogen"
## [1] 5474
## [1] "removing: path_bun_t_prophyrins"
## [1] 5474
## [1] "removing: path_bun_t_propoxyphene"
## [1] 5474
## [1] "removing: path_bun_t_prostate"
## [1] 5474
## [1] "removing: path_bun_t_quinide"
## [1] 5474
## [1] "removing: path_bun_t_quinine"
## [1] 5474
## [1] "removing: path_bun_t_reagent"
## [1] 5474
## [1] "removing: path_bun_t_renin"
## [1] 5474
## [1] "removing: path_bun_t_retinal"
## [1] 5474
## [1] "removing: path_bun_t_rickettsia"
## [1] 5474
## [1] "removing: path_bun_t_rotovirus"
## [1] 5474
## [1] "removing: path_bun_t_rubella"
## [1] 5474
## [1] "removing: path_bun_t_salicylate"
## [1] 5474
## [1] "removing: path_bun_t_salmonella"
## [1] 5474
## [1] "removing: path_bun_t_scan"
## [1] 5474
## [1] "removing: path_bun_t_screen"
## [1] 5473
## [1] "removing: path_bun_t_sedative"
## [1] 5473
## [1] "removing: path_bun_t_semen"
## [1] 5472
## [1] "removing: path_bun_t_sequence"
## [1] 5472
## [1] "removing: path_bun_t_serotonin"
## [1] 5472
## [1] "removing: path_bun_t_silica"
## [1] 5472
## [1] "removing: path_bun_t_sirolimus"
## [1] 5471
## [1] "removing: path_bun_t_skin"
## [1] 5471
## [1] "removing: path_bun_t_slenium"
## [1] 5471
## [1] "removing: path_bun_t_specimen"
## [1] 5470
## [1] "removing: path_bun_t_sperm"
## [1] 5470
## [1] "removing: path_bun_t_steroid"
## [1] 5470
## [1] "removing: path_bun_t_stimulation"
## [1] 5470
## [1] "removing: path_bun_t_syphilis"
## [1] 5469
## [1] "removing: path_bun_t_syringe"
## [1] 5469
## [1] "removing: path_bun_t_tacrolims"
## [1] 5469
## [1] "removing: path_bun_t_thawing"
## [1] 5469
## [1] "removing: path_bun_t_theophylline"
## [1] 5469
## [1] "removing: path_bun_t_tobramycin"
## [1] 5469
## [1] "removing: path_bun_t_tolerance"
## [1] 5469
## [1] "removing: path_bun_t_toxoplasma"
## [1] 5469
## [1] "removing: path_bun_t_tpiramate"
## [1] 5469
## [1] "removing: path_bun_t_transfusion"
## [1] 5469
## [1] "removing: path_bun_t_tumor"
## [1] 5469
## [1] "removing: path_bun_t_typing"
## [1] 5469
## [1] "removing: path_bun_t_vancomycin"
## [1] 5469
## [1] "removing: path_bun_t_vein"
## [1] 5469
## [1] "removing: path_bun_t_venipuncture"
## [1] 5469
## [1] "removing: path_bun_t_west"
## [1] 5469
## [1] "removing: path_bun_t_with_scope"
## [1] 5469
## [1] "removing: path_bun_t_zonisamide"
## [1] 5469
## [1] "removing: anes_bun_t_abdom"
## [1] 5469
## [1] "removing: anes_bun_t_add - on"
## [1] 5469
## [1] "removing: anes_bun_t_adrenal"
## [1] 5469
## [1] "removing: anes_bun_t_amputation"
## [1] 5469
## [1] "removing: anes_bun_t_analg"
## [1] 5469
## [1] "removing: anes_bun_t_area"
## [1] 5468
## [1] "removing: anes_bun_t_arest"
## [1] 5468
## [1] "removing: anes_bun_t_arteriography"
## [1] 5468
## [1] "removing: anes_bun_t_artery"
## [1] 5468
## [1] "removing: anes_bun_t_biopsy"
## [1] 5468
## [1] "removing: anes_bun_t_bladder"
## [1] 5468
## [1] "removing: anes_bun_t_blood"
## [1] 5468
## [1] "removing: anes_bun_t_breast"
## [1] 5468
## [1] "removing: anes_bun_t_bronchi"
## [1] 5468
## [1] "removing: anes_bun_t_burn"
## [1] 5468
## [1] "removing: anes_bun_t_casting"
## [1] 5468
## [1] "removing: anes_bun_t_cervix"
## [1] 5468
## [1] "removing: anes_bun_t_chemonucleolysis"
## [1] 5468
## [1] "removing: anes_bun_t_chest"
## [1] 5468
## [1] "removing: anes_bun_t_cleft"
## [1] 5468
## [1] "removing: anes_bun_t_cord"
## [1] 5468
## [1] "removing: anes_bun_t_corneal"
## [1] 5468
## [1] "removing: anes_bun_t_cs"
## [1] 5468
## [1] "removing: anes_bun_t_debride"
## [1] 5468
## [1] "removing: anes_bun_t_deliver"
## [1] 5468
## [1] "removing: anes_bun_t_drainage"
## [1] 5468
## [1] "removing: anes_bun_t_duct"
## [1] 5468
## [1] "removing: anes_bun_t_ear"
## [1] 5468
## [1] "removing: anes_bun_t_elbow"
## [1] 5468
## [1] "removing: anes_bun_t_electroshock"
## [1] 5468
## [1] "removing: anes_bun_t_embolectomy"
## [1] 5468
## [1] "removing: anes_bun_t_endoscopy"
## [1] 5468
## [1] "removing: anes_bun_t_epidural"
## [1] 5468
## [1] "removing: anes_bun_t_esophag"
## [1] 5468
## [1] "removing: anes_bun_t_eyelid"
## [1] 5468
## [1] "removing: anes_bun_t_facial"
## [1] 5468
## [1] "removing: anes_bun_t_fat"
## [1] 5468
## [1] "removing: anes_bun_t_femoral"
## [1] 5468
## [1] "removing: anes_bun_t_fentanyl"
## [1] 5468
## [1] "removing: anes_bun_t_genitalia"
## [1] 5468
## [1] "removing: anes_bun_t_glands"
## [1] 5468
## [1] "removing: anes_bun_t_head"
## [1] 5467
## [1] "removing: anes_bun_t_hernia"
## [1] 5467
## [1] "removing: anes_bun_t_humer"
## [1] 5467
## [1] "removing: anes_bun_t_hydromorphone"
## [1] 5467
## [1] "removing: anes_bun_t_hysterectomy"
## [1] 5467
## [1] "removing: anes_bun_t_image"
## [1] 5467
## [1] "removing: anes_bun_t_insertion"
## [1] 5467
## [1] "removing: anes_bun_t_intracranial"
## [1] 5467
## [1] "removing: anes_bun_t_iredectomy"
## [1] 5467
## [1] "removing: anes_bun_t_joint"
## [1] 5466
## [1] "removing: anes_bun_t_ketorolac"
## [1] 5466
## [1] "removing: anes_bun_t_kidney"
## [1] 5466
## [1] "removing: anes_bun_t_larynx"
## [1] 5466
## [1] "removing: anes_bun_t_layer"
## [1] 5466
## [1] "removing: anes_bun_t_lip"
## [1] 5466
## [1] "removing: anes_bun_t_liver"
## [1] 5466
## [1] "removing: anes_bun_t_local"
## [1] 5466
## [1] "removing: anes_bun_t_lumbar"
## [1] 5466
## [1] "removing: anes_bun_t_lung"
## [1] 5466
## [1] "removing: anes_bun_t_major"
## [1] 5466
## [1] "removing: anes_bun_t_manipulation"
## [1] 5466
## [1] "removing: anes_bun_t_midazolam"
## [1] 5466
## [1] "removing: anes_bun_t_mod_sed"
## [1] 5465
## [1] "removing: anes_bun_t_neck"
## [1] 5465
## [1] "removing: anes_bun_t_nerve"
## [1] 5465
## [1] "removing: anes_bun_t_open"
## [1] 5465
## [1] "removing: anes_bun_t_organ"
## [1] 5465
## [1] "removing: anes_bun_t_pacemaker"
## [1] 5465
## [1] "removing: anes_bun_t_palate"
## [1] 5465
## [1] "removing: anes_bun_t_pelvic"
## [1] 5465
## [1] "removing: anes_bun_t_pelvis"
## [1] 5465
## [1] "removing: anes_bun_t_penis"
## [1] 5465
## [1] "removing: anes_bun_t_percutaneous"
## [1] 5465
## [1] "removing: anes_bun_t_plastic"
## [1] 5465
## [1] "removing: anes_bun_t_propofol"
## [1] 5465
## [1] "removing: anes_bun_t_prostate"
## [1] 5465
## [1] "removing: anes_bun_t_pump"
## [1] 5465
## [1] "removing: anes_bun_t_puncture"
## [1] 5465
## [1] "removing: anes_bun_t_radical"
## [1] 5465
## [1] "removing: anes_bun_t_release"
## [1] 5465
## [1] "removing: anes_bun_t_removal"
## [1] 5465
## [1] "removing: anes_bun_t_repair"
## [1] 5465
## [1] "removing: anes_bun_t_replace"
## [1] 5465
## [1] "removing: anes_bun_t_rib"
## [1] 5465
## [1] "removing: anes_bun_t_sedation"
## [1] 5465
## [1] "removing: anes_bun_t_shoulder"
## [1] 5465
## [1] "removing: anes_bun_t_skull"
## [1] 5465
## [1] "removing: anes_bun_t_sperm"
## [1] 5465
## [1] "removing: anes_bun_t_spine"
## [1] 5465
## [1] "removing: anes_bun_t_spit"
## [1] 5465
## [1] "removing: anes_bun_t_sternal"
## [1] 5465
## [1] "removing: anes_bun_t_stone"
## [1] 5465
## [1] "removing: anes_bun_t_tendon"
## [1] 5465
## [1] "removing: anes_bun_t_testis"
## [1] 5465
## [1] "removing: anes_bun_t_thigh"
## [1] 5465
## [1] "removing: anes_bun_t_thyriod"
## [1] 5465
## [1] "removing: anes_bun_t_trachea"
## [1] 5465
## [1] "removing: anes_bun_t_transplant"
## [1] 5465
## [1] "removing: anes_bun_t_tromethamine"
## [1] 5465
## [1] "removing: anes_bun_t_tubal"
## [1] 5465
## [1] "removing: anes_bun_t_tympanotomy"
## [1] 5465
## [1] "removing: anes_bun_t_upper"
## [1] 5465
## [1] "removing: anes_bun_t_ureter"
## [1] 5465
## [1] "removing: anes_bun_t_urethra"
## [1] 5465
## [1] "removing: anes_bun_t_vag"
## [1] 5465
## [1] "removing: anes_bun_t_vein"
## [1] 5465
## [1] "removing: anes_bun_t_ventilation"
## [1] 5465
## [1] "removing: anes_bun_t_vesectomy"
## [1] 5465
## [1] "removing: anes_bun_t_vessel"
## [1] 5465
## [1] "removing: anes_bun_t_viteroretinal"
## [1] 5465
## [1] "removing: anes_bun_t_wall"
## [1] 5465
## [1] "removing: anes_bun_t_wrist"
## [1] 5465
## [1] "removing: faci_bun_t_advanced"
## [1] 5465
## [1] "removing: faci_bun_t_analysis"
## [1] 5465
## [1] "removing: faci_bun_t_annual"
## [1] 5465
## [1] "removing: faci_bun_t_assessmnt"
## [1] 5465
## [1] "removing: faci_bun_t_audit"
## [1] 5465
## [1] "removing: faci_bun_t_basic"
## [1] 5465
## [1] "removing: faci_bun_t_behav"
## [1] 5465
## [1] "removing: faci_bun_t_bus"
## [1] 5465
## [1] "removing: faci_bun_t_care"
## [1] 5465
## [1] "removing: faci_bun_t_chng"
## [1] 5465
## [1] "removing: faci_bun_t_computer"
## [1] 5465
## [1] "removing: faci_bun_t_conf"
## [1] 5465
## [1] "removing: faci_bun_t_consultation"
## [1] 5465
## [1] "removing: faci_bun_t_counseling"
## [1] 5465
## [1] "removing: faci_bun_t_critical"
## [1] 5465
## [1] "removing: faci_bun_t_data"
## [1] 5465
## [1] "removing: faci_bun_t_direct"
## [1] 5465
## [1] "removing: faci_bun_t_disability"
## [1] 5465
## [1] "removing: faci_bun_t_discharge"
## [1] 5465
## [1] "removing: faci_bun_t_dommicl"
## [1] 5465
## [1] "removing: faci_bun_t_exam"
## [1] 5465
## [1] "removing: faci_bun_t_fac"
## [1] 5465
## [1] "removing: faci_bun_t_facility"
## [1] 5465
## [1] "removing: faci_bun_t_home"
## [1] 5464
## [1] "removing: faci_bun_t_hospice"
## [1] 5464
## [1] "removing: faci_bun_t_hospital"
## [1] 5464
## [1] "removing: faci_bun_t_initial"
## [1] 5464
## [1] "removing: faci_bun_t_inpatient"
## [1] 5464
## [1] "removing: faci_bun_t_interfacility"
## [1] 5464
## [1] "removing: faci_bun_t_interpof"
## [1] 5464
## [1] "removing: faci_bun_t_life"
## [1] 5464
## [1] "removing: faci_bun_t_nonemergency"
## [1] 5464
## [1] "removing: faci_bun_t_noner"
## [1] 5464
## [1] "removing: faci_bun_t_nursing"
## [1] 5464
## [1] "removing: faci_bun_t_observation"
## [1] 5464
## [1] "removing: faci_bun_t_on_call"
## [1] 5464
## [1] "removing: faci_bun_t_online"
## [1] 5464
## [1] "removing: faci_bun_t_phlebotomy"
## [1] 5464
## [1] "removing: faci_bun_t_phone"
## [1] 5464
## [1] "removing: faci_bun_t_physician"
## [1] 5464
## [1] "removing: faci_bun_t_preventine"
## [1] 5464
## [1] "removing: faci_bun_t_prolong"
## [1] 5463
## [1] "removing: faci_bun_t_service"
## [1] 5463
## [1] "removing: faci_bun_t_smoking"
## [1] 5463
## [1] "removing: faci_bun_t_standby"
## [1] 5463
## [1] "removing: faci_bun_t_subsequent"
## [1] 5463
## [1] "removing: faci_bun_t_support"
## [1] 5463
## [1] "removing: faci_bun_t_taxi"
## [1] 5463
## [1] "removing: faci_bun_t_team"
## [1] 5463
## [1] "removing: faci_bun_t_transort"
## [1] 5463
## [1] "removing: faci_bun_t_travel"
## [1] 5463
## [1] "removing: faci_bun_t_van"
## [1] 5463
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 263 x 2
##    name                     correlation
##    <chr>                          <dbl>
##  1 surg_bun_t_tum                 0.534
##  2 surg_bun_t_foot                0.372
##  3 anes_bun_t_anes                0.327
##  4 anes_bun_t_anesth              0.322
##  5 surg_bun_t_toe                 0.291
##  6 surg_bun_t_exc                 0.285
##  7 anes_bun_t_surg                0.218
##  8 anes_bun_t_lower               0.217
##  9 surg_bun_t_compression         0.216
## 10 surg_bun_t_decompression       0.216
## # ... with 253 more rows
toe_nail2_clean %>% get_tag_density_information("surg_bun_t_tum") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ surg_bun_t_tum"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 9620
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[surg_bun_t_tum==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 262 x 2
##    name                     correlation
##    <chr>                          <dbl>
##  1 anes_bun_t_anes                0.606
##  2 surg_bun_t_compression         0.603
##  3 surg_bun_t_decompression       0.603
##  4 surg_bun_t_lower               0.603
##  5 surg_bun_t_release             0.603
##  6 anes_bun_t_surg                0.598
##  7 anes_bun_t_lower               0.594
##  8 anes_bun_t_anesth              0.588
##  9 medi_bun_t_choline             0.561
## 10 anes_bun_t_leg                 0.544
## # ... with 252 more rows
toe_nail2_clean %>% get_tag_density_information("anes_bun_t_anes") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ anes_bun_t_anes"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 450
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[anes_bun_t_anes==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 229 x 2
##    name                 correlation
##    <chr>                      <dbl>
##  1 medi_bun_t_wound           0.308
##  2 surg_bun_t_sub             0.271
##  3 medi_bun_t_analy           0.238
##  4 faci_bun_t_visit           0.229
##  5 faci_bun_t_dept            0.214
##  6 faci_bun_t_emergency       0.214
##  7 surg_bun_t_tiss            0.210
##  8 path_bun_t_immuno          0.209
##  9 faci_bun_t_pat             0.197
## 10 faci_bun_t_office          0.197
## # ... with 219 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_wound") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_wound"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 517
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_wound==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 228 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit             0.275
##  2 faci_bun_t_dept              0.270
##  3 faci_bun_t_emergency         0.270
##  4 path_bun_t_patho             0.246
##  5 path_bun_t_pathologist       0.246
##  6 path_bun_t_tissue            0.239
##  7 faci_bun_t_pat               0.235
##  8 faci_bun_t_office            0.235
##  9 path_bun_t_detect            0.221
## 10 path_bun_t_agent             0.219
## # ... with 218 more rows
toe_nail2_clean %>% get_tag_density_information("faci_bun_t_emergency") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ faci_bun_t_emergency"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 157
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[faci_bun_t_emergency==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 219 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit             0.276
##  2 faci_bun_t_pat               0.265
##  3 faci_bun_t_office            0.265
##  4 path_bun_t_patho             0.263
##  5 path_bun_t_pathologist       0.263
##  6 path_bun_t_tissue            0.255
##  7 path_bun_t_detect            0.235
##  8 path_bun_t_agent             0.233
##  9 path_bun_t_dna               0.222
## 10 path_bun_t_drug              0.157
## # ... with 209 more rows
toe_nail2_clean %>% get_tag_density_information("path_bun_t_patho") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ path_bun_t_patho"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 104
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[path_bun_t_patho==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 216 x 2
##    name               correlation
##    <chr>                    <dbl>
##  1 faci_bun_t_visit         0.284
##  2 faci_bun_t_pat           0.272
##  3 faci_bun_t_office        0.272
##  4 path_bun_t_drug          0.168
##  5 surg_bun_t_debrid        0.165
##  6 surg_bun_t_debride       0.165
##  7 path_bun_t_test          0.133
##  8 path_bun_t_lipid         0.131
##  9 medi_bun_t_inject        0.127
## 10 faci_bun_t_est           0.119
## # ... with 206 more rows
toe_nail2_clean %>% get_tag_density_information("path_bun_t_drug") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ path_bun_t_drug"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 522
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[path_bun_t_drug==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 215 x 2
##    name               correlation
##    <chr>                    <dbl>
##  1 faci_bun_t_visit         0.290
##  2 faci_bun_t_pat           0.278
##  3 faci_bun_t_office        0.277
##  4 surg_bun_t_debrid        0.170
##  5 surg_bun_t_debride       0.170
##  6 path_bun_t_lipid         0.135
##  7 medi_bun_t_inject        0.131
##  8 radi_bun_t_exam          0.123
##  9 medi_bun_t_stud          0.120
## 10 path_bun_t_panel         0.119
## # ... with 205 more rows
toe_nail2_clean %>% get_tag_density_information("surg_bun_t_debrid") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ surg_bun_t_debrid"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 63.3
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[surg_bun_t_debrid==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 213 x 2
##    name              correlation
##    <chr>                   <dbl>
##  1 faci_bun_t_visit        0.34 
##  2 faci_bun_t_pat          0.326
##  3 faci_bun_t_office       0.325
##  4 path_bun_t_lipid        0.155
##  5 radi_bun_t_exam         0.140
##  6 medi_bun_t_stud         0.137
##  7 faci_bun_t_est          0.137
##  8 path_bun_t_panel        0.137
##  9 radi_bun_t_x-ray        0.136
## 10 surg_bun_t_sub          0.135
## # ... with 203 more rows
toe_nail2_clean %>% get_tag_density_information("path_bun_t_lipid") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ path_bun_t_lipid"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 73.7
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[path_bun_t_lipid==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 211 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit             0.343
##  2 faci_bun_t_pat               0.337
##  3 faci_bun_t_office            0.337
##  4 medi_bun_t_stud              0.142
##  5 surg_bun_t_sub               0.140
##  6 radi_bun_t_exam              0.135
##  7 radi_bun_t_x-ray             0.132
##  8 faci_bun_t_est               0.128
##  9 radi_bun_t_lumbar            0.12 
## 10 radi_bun_t_without_dye       0.119
## # ... with 201 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_stud") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_stud"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 174
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_stud==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 210 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit             0.347
##  2 faci_bun_t_pat               0.340
##  3 faci_bun_t_office            0.340
##  4 surg_bun_t_sub               0.142
##  5 radi_bun_t_exam              0.138
##  6 radi_bun_t_x-ray             0.135
##  7 faci_bun_t_est               0.124
##  8 radi_bun_t_lumbar            0.122
##  9 radi_bun_t_without_dye       0.122
## 10 path_bun_t_detect            0.118
## # ... with 200 more rows
toe_nail2_clean %>% get_tag_density_information("surg_bun_t_sub") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ surg_bun_t_sub"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 411
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[surg_bun_t_sub==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 209 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit             0.355
##  2 faci_bun_t_pat               0.348
##  3 faci_bun_t_office            0.348
##  4 radi_bun_t_exam              0.143
##  5 radi_bun_t_x-ray             0.140
##  6 radi_bun_t_lumbar            0.126
##  7 radi_bun_t_without_dye       0.126
##  8 path_bun_t_detect            0.122
##  9 radi_bun_t_mri               0.122
## 10 faci_bun_t_est               0.122
## # ... with 199 more rows
toe_nail2_clean %>% get_tag_density_information("radi_bun_t_lumbar") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ radi_bun_t_lumbar"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 270
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[radi_bun_t_lumbar==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 208 x 2
##    name              correlation
##    <chr>                   <dbl>
##  1 faci_bun_t_visit        0.363
##  2 faci_bun_t_pat          0.356
##  3 faci_bun_t_office       0.356
##  4 radi_bun_t_exam         0.145
##  5 radi_bun_t_x-ray        0.142
##  6 faci_bun_t_est          0.125
##  7 path_bun_t_detect       0.124
##  8 path_bun_t_agent        0.122
##  9 path_bun_t_dna          0.121
## 10 radi_bun_t_foot         0.109
## # ... with 198 more rows
toe_nail2_clean %>% get_tag_density_information("radi_bun_t_exam") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ radi_bun_t_exam"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 30.7
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[radi_bun_t_exam==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 190 x 2
##    name                correlation
##    <chr>                     <dbl>
##  1 faci_bun_t_visit          0.358
##  2 faci_bun_t_pat            0.351
##  3 faci_bun_t_office         0.351
##  4 path_bun_t_detect         0.128
##  5 path_bun_t_agent          0.126
##  6 path_bun_t_dna            0.126
##  7 faci_bun_t_est            0.124
##  8 medi_bun_t_hpv            0.110
##  9 medi_bun_t_evaluat        0.107
## 10 medi_bun_t_exercise       0.101
## # ... with 180 more rows
toe_nail2_clean %>% get_tag_density_information("path_bun_t_detect") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ path_bun_t_detect"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 96
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[path_bun_t_detect==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 189 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit            0.360 
##  2 faci_bun_t_pat              0.353 
##  3 faci_bun_t_office           0.352 
##  4 faci_bun_t_est              0.127 
##  5 medi_bun_t_hpv              0.111 
##  6 medi_bun_t_evaluat          0.108 
##  7 medi_bun_t_exercise         0.102 
##  8 medi_bun_t_psytx            0.100 
##  9 surg_bun_t_art              0.0978
## 10 medi_bun_t_therapeutic      0.0971
## # ... with 179 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_hpv") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_hpv"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 73.6
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_hpv==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 188 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit            0.363 
##  2 faci_bun_t_pat              0.357 
##  3 faci_bun_t_office           0.357 
##  4 faci_bun_t_est              0.125 
##  5 medi_bun_t_evaluat          0.109 
##  6 medi_bun_t_exercise         0.103 
##  7 medi_bun_t_psytx            0.102 
##  8 surg_bun_t_art              0.0989
##  9 medi_bun_t_therapeutic      0.0986
## 10 surg_bun_t_arthro           0.0905
## # ... with 178 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_evaluat") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_evaluat"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 82.8
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_evaluat==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 187 x 2
##    name                          correlation
##    <chr>                               <dbl>
##  1 faci_bun_t_visit                   0.366 
##  2 faci_bun_t_pat                     0.360 
##  3 faci_bun_t_office                  0.360 
##  4 faci_bun_t_est                     0.128 
##  5 surg_bun_t_art                     0.100 
##  6 surg_bun_t_arthro                  0.0919
##  7 surg_bun_t_arthroscopy             0.0919
##  8 surg_bun_t_knee                    0.0919
##  9 medi_bun_t_methylprednisolone      0.091 
## 10 medi_bun_t_prednisolone            0.091 
## # ... with 177 more rows
toe_nail2_clean %>% get_tag_density_information("surg_bun_t_art") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ surg_bun_t_art"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 130
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[surg_bun_t_art==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 180 x 2
##    name                          correlation
##    <chr>                               <dbl>
##  1 faci_bun_t_visit                   0.369 
##  2 faci_bun_t_pat                     0.363 
##  3 faci_bun_t_office                  0.363 
##  4 faci_bun_t_est                     0.131 
##  5 medi_bun_t_methylprednisolone      0.0918
##  6 medi_bun_t_prednisolone            0.0918
##  7 radi_bun_t_breast                  0.09  
##  8 radi_bun_t_mammo                   0.0879
##  9 medi_bun_t_inject                  0.0862
## 10 medi_bun_t_services                0.0857
## # ... with 170 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_methylprednisolone") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_methylprednisolone"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 65.7
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_methylprednisolone==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 178 x 2
##    name                correlation
##    <chr>                     <dbl>
##  1 faci_bun_t_visit         0.38  
##  2 faci_bun_t_pat           0.373 
##  3 faci_bun_t_office        0.373 
##  4 faci_bun_t_est           0.129 
##  5 radi_bun_t_breast        0.0935
##  6 radi_bun_t_mammo         0.0914
##  7 medi_bun_t_services      0.0891
##  8 medi_bun_t_psytx         0.0819
##  9 medi_bun_t_exercise      0.0795
## 10 medi_bun_t_eye_exam      0.0794
## # ... with 168 more rows
toe_nail2_clean %>% get_tag_density_information("radi_bun_t_breast") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ radi_bun_t_breast"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 38.7
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[radi_bun_t_breast==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 177 x 2
##    name                correlation
##    <chr>                     <dbl>
##  1 faci_bun_t_visit         0.385 
##  2 faci_bun_t_pat           0.378 
##  3 faci_bun_t_office        0.378 
##  4 faci_bun_t_est           0.130 
##  5 medi_bun_t_services      0.0896
##  6 medi_bun_t_psytx         0.0827
##  7 medi_bun_t_exercise      0.0802
##  8 medi_bun_t_eye_exam      0.08  
##  9 surg_bun_t_finger        0.0781
## 10 path_bun_t_assay         0.0762
## # ... with 167 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_services") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_services"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 155
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_services==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 176 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit            0.386 
##  2 faci_bun_t_pat              0.379 
##  3 faci_bun_t_office           0.379 
##  4 faci_bun_t_est              0.132 
##  5 medi_bun_t_psytx            0.0835
##  6 medi_bun_t_exercise         0.081 
##  7 medi_bun_t_eye_exam         0.0807
##  8 surg_bun_t_finger           0.0786
##  9 path_bun_t_assay            0.0769
## 10 medi_bun_t_therapeutic      0.0766
## # ... with 166 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_psytx") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_psytx"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 29.5
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_psytx==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 174 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit            0.385 
##  2 faci_bun_t_pat              0.378 
##  3 faci_bun_t_office           0.377 
##  4 faci_bun_t_est              0.131 
##  5 medi_bun_t_exercise         0.0824
##  6 medi_bun_t_eye_exam         0.082 
##  7 surg_bun_t_finger           0.0793
##  8 path_bun_t_assay            0.0782
##  9 medi_bun_t_therapeutic      0.078 
## 10 surg_bun_t_add-on           0.0762
## # ... with 164 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_eye_exam") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_eye_exam"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 33.5
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_eye_exam==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 172 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit            0.386 
##  2 faci_bun_t_pat              0.378 
##  3 faci_bun_t_office           0.378 
##  4 faci_bun_t_est              0.129 
##  5 medi_bun_t_exercise         0.0834
##  6 surg_bun_t_finger           0.0799
##  7 path_bun_t_assay            0.0791
##  8 medi_bun_t_therapeutic      0.079 
##  9 surg_bun_t_add-on           0.0768
## 10 path_bun_t_test             0.0752
## # ... with 162 more rows
toe_nail2_clean %>% get_tag_density_information("medi_bun_t_exercise") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_exercise"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 38.9
## $dist_plots

## 
## $stat_tables

toe_nail2_clean <- toe_nail2_clean[medi_bun_t_exercise==F]
toe_nail2_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail2_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 171 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_visit            0.386 
##  2 faci_bun_t_pat              0.378 
##  3 faci_bun_t_office           0.378 
##  4 faci_bun_t_est              0.130 
##  5 surg_bun_t_finger           0.0806
##  6 path_bun_t_assay            0.0803
##  7 surg_bun_t_add-on           0.0776
##  8 medi_bun_t_boot             0.0766
##  9 path_bun_t_test             0.0726
## 10 radi_bun_t_without_dye      0.0724
## # ... with 161 more rows
toe_nail2_clean %>% get_tag_density_information("faci_bun_t_visit") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ faci_bun_t_visit"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 15.9
## $dist_plots

## 
## $stat_tables

toe_nail_w_visit <- toe_nail2_clean[faci_bun_t_visit==T]
toe_nail_n_visit <- toe_nail2_clean[faci_bun_t_visit==F]

##toe_nail_w_visit

toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 162 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 surg_bun_t_add-on            0.148 
##  2 surg_bun_t_finger            0.107 
##  3 surg_bun_t_duct              0.0894
##  4 surg_bun_t_sperm             0.0894
##  5 path_bun_t_vitamin           0.0891
##  6 path_bun_t_assay             0.089 
##  7 path_bun_t_progesterone      0.0881
##  8 path_bun_t_sex               0.0881
##  9 radi_bun_t_without_dye       0.0875
## 10 faci_bun_t_est               0.0836
## # ... with 152 more rows
toe_nail_w_visit[`surg_bun_t_add-on` ==T] %>% nrow()
## [1] 2
toe_nail_w_visit <- toe_nail_w_visit[`surg_bun_t_add-on` ==F] 
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 160 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 surg_bun_t_finger            0.108 
##  2 surg_bun_t_duct              0.0905
##  3 surg_bun_t_sperm             0.0905
##  4 path_bun_t_assay             0.0905
##  5 path_bun_t_vitamin           0.0903
##  6 faci_bun_t_est               0.0894
##  7 path_bun_t_progesterone      0.0893
##  8 path_bun_t_sex               0.0893
##  9 radi_bun_t_without_dye       0.0888
## 10 duration_mean                0.0831
## # ... with 150 more rows
toe_nail_w_visit[surg_bun_t_finger==T] %>% nrow()
## [1] 1
toe_nail_w_visit <- toe_nail_w_visit[surg_bun_t_finger==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 159 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 path_bun_t_assay             0.0913
##  2 surg_bun_t_duct              0.0911
##  3 surg_bun_t_sperm             0.0911
##  4 path_bun_t_vitamin           0.0909
##  5 path_bun_t_progesterone      0.0899
##  6 path_bun_t_sex               0.0899
##  7 radi_bun_t_without_dye       0.0894
##  8 faci_bun_t_est               0.0882
##  9 duration_mean                0.0837
## 10 duration_max                 0.0837
## # ... with 149 more rows
toe_nail_w_visit %>% get_tag_density_information("path_bun_t_assay") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ path_bun_t_assay"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 58.7
## $dist_plots

## 
## $stat_tables

toe_nail_w_visit <- toe_nail_w_visit[path_bun_t_assay==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 140 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 surg_bun_t_duct              0.093 
##  2 surg_bun_t_sperm             0.093 
##  3 faci_bun_t_est               0.093 
##  4 radi_bun_t_without_dye       0.0914
##  5 duration_max                 0.0854
##  6 duration_mean                0.0854
##  7 path_bun_t_cytopath          0.0744
##  8 path_bun_t_fluid             0.0724
##  9 radi_bun_t_mri               0.0678
## 10 surg_bun_t_interlaminar      0.0652
## # ... with 130 more rows
# toe_nail_w_visit %>% get_tag_density_information("surg_bun_t_duct") %>% print()
# only one observation
toe_nail_w_visit <- toe_nail_w_visit[path_bun_t_assay==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 140 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 surg_bun_t_duct              0.093 
##  2 surg_bun_t_sperm             0.093 
##  3 faci_bun_t_est               0.093 
##  4 radi_bun_t_without_dye       0.0914
##  5 duration_max                 0.0854
##  6 duration_mean                0.0854
##  7 path_bun_t_cytopath          0.0744
##  8 path_bun_t_fluid             0.0724
##  9 radi_bun_t_mri               0.0678
## 10 surg_bun_t_interlaminar      0.0652
## # ... with 130 more rows
# toe_nail_w_visit %>% get_tag_density_information("surg_bun_t_sperm") %>% print()
# only one observation
toe_nail_w_visit <- toe_nail_w_visit[surg_bun_t_sperm==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 138 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 faci_bun_t_est               0.0919
##  2 radi_bun_t_without_dye       0.0919
##  3 duration_mean                0.0858
##  4 duration_max                 0.0858
##  5 path_bun_t_cytopath          0.0747
##  6 path_bun_t_fluid             0.0727
##  7 radi_bun_t_mri               0.0681
##  8 surg_bun_t_interlaminar      0.0655
##  9 surg_bun_t_lamina            0.0655
## 10 surg_bun_t_njx               0.0655
## # ... with 128 more rows
toe_nail_w_visit %>% get_tag_density_information("path_bun_t_cytopath") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ path_bun_t_cytopath"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 46.1
## $dist_plots

## 
## $stat_tables

# only one observation
toe_nail_w_visit <- toe_nail_w_visit[path_bun_t_cytopath==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 136 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 faci_bun_t_est               0.0952
##  2 radi_bun_t_without_dye       0.0923
##  3 duration_max                 0.0861
##  4 duration_mean                0.0861
##  5 radi_bun_t_mri               0.0684
##  6 surg_bun_t_interlaminar      0.0658
##  7 surg_bun_t_lamina            0.0658
##  8 surg_bun_t_njx               0.0658
##  9 medi_bun_t_inject            0.0638
## 10 radi_bun_t_ct                0.0621
## # ... with 126 more rows
toe_nail_w_visit %>% get_tag_density_information("radi_bun_t_mri") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ radi_bun_t_mri"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 48.9
## $dist_plots

## 
## $stat_tables

# only one observation
toe_nail_w_visit <- toe_nail_w_visit[radi_bun_t_mri==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 132 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 faci_bun_t_est               0.0982
##  2 duration_mean                0.0864
##  3 duration_max                 0.0864
##  4 surg_bun_t_interlaminar      0.066 
##  5 surg_bun_t_lamina            0.066 
##  6 surg_bun_t_njx               0.066 
##  7 medi_bun_t_inject            0.0642
##  8 radi_bun_t_ct                0.0623
##  9 radi_bun_t_without_dye       0.0623
## 10 medi_bun_t_manual            0.0618
## # ... with 122 more rows
# toe_nail_w_visit %>% get_tag_density_information("surg_bun_t_interlaminar") %>% print()
# only one observation
toe_nail_w_visit <- toe_nail_w_visit[surg_bun_t_interlaminar==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 129 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_est              0.1   
##  2 duration_mean               0.0866
##  3 duration_max                0.0866
##  4 medi_bun_t_inject           0.0645
##  5 radi_bun_t_ct               0.0625
##  6 radi_bun_t_without_dye      0.0625
##  7 medi_bun_t_manual           0.0619
##  8 path_bun_t_renal            0.0576
##  9 surg_bun_t_paravert         0.0567
## 10 medi_bun_t_hearing          0.0543
## # ... with 119 more rows
toe_nail_w_visit %>% get_tag_density_information("medi_bun_t_inject") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_inject"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 36.7
## $dist_plots

## 
## $stat_tables

# only one observation
toe_nail_w_visit <- toe_nail_w_visit[medi_bun_t_inject==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 125 x 2
##    name                   correlation
##    <chr>                        <dbl>
##  1 faci_bun_t_est              0.112 
##  2 duration_mean               0.0927
##  3 duration_max                0.0927
##  4 radi_bun_t_ct               0.067 
##  5 radi_bun_t_without_dye      0.067 
##  6 medi_bun_t_manual           0.0663
##  7 path_bun_t_renal            0.0617
##  8 surg_bun_t_paravert         0.0607
##  9 medi_bun_t_boot             0.059 
## 10 medi_bun_t_hearing          0.0582
## # ... with 115 more rows
toe_nail_w_visit %>% get_tag_density_information("radi_bun_t_ct") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ radi_bun_t_ct"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 16.7
## $dist_plots

## 
## $stat_tables

# only one observation
toe_nail_w_visit <- toe_nail_w_visit[radi_bun_t_ct==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 123 x 2
##    name                           correlation
##    <chr>                                <dbl>
##  1 faci_bun_t_est                      0.113 
##  2 duration_max                        0.0929
##  3 duration_mean                       0.0929
##  4 medi_bun_t_manual                   0.0665
##  5 path_bun_t_renal                    0.0619
##  6 surg_bun_t_paravert                 0.0609
##  7 medi_bun_t_boot                     0.0594
##  8 medi_bun_t_hearing                  0.0584
##  9 medi_bun_t_medroxyprogesterone      0.0561
## 10 medi_bun_t_progesterone             0.0561
## # ... with 113 more rows
toe_nail_w_visit %>% get_tag_density_information("medi_bun_t_manual") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_manual"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 93.4
## $dist_plots

## 
## $stat_tables

# only one observation
toe_nail_w_visit <- toe_nail_w_visit[medi_bun_t_manual==F]
toe_nail_w_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_w_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 120 x 2
##    name                           correlation
##    <chr>                                <dbl>
##  1 faci_bun_t_est                      0.116 
##  2 path_bun_t_renal                    0.0623
##  3 surg_bun_t_paravert                 0.0612
##  4 medi_bun_t_boot                     0.06  
##  5 medi_bun_t_hearing                  0.0587
##  6 medi_bun_t_medroxyprogesterone      0.0564
##  7 medi_bun_t_progesterone             0.0564
##  8 surg_bun_t_endoscopy                0.0528
##  9 surg_bun_t_nasal                    0.0528
## 10 faci_bun_t_office                   0.0508
## # ... with 110 more rows
toe_nail_w_visit %>% get_tag_density_information("path_bun_t_renal") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ path_bun_t_renal"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 49.5
## $dist_plots

## 
## $stat_tables

# only one observation
toe_nail_w_visit <- toe_nail_w_visit[path_bun_t_renal==F]
toe_nail_w_visit <- toe_nail_w_visit[,`:=`(
  surg_sp_name_clean = surg_sp_npi %>% map_chr(get_npi_standard_name),
  surg_bp_name_clean = surg_bp_npi %>% map_chr(get_npi_standard_name),
  
  medi_sp_name_clean = medi_sp_npi %>% map_chr(get_npi_standard_name),
  medi_bp_name_clean = medi_bp_npi %>% map_chr(get_npi_standard_name),
  
  radi_sp_name_clean = radi_sp_npi %>% map_chr(get_npi_standard_name),
  radi_bp_name_clean = radi_bp_npi %>% map_chr(get_npi_standard_name),
  
  path_sp_name_clean = path_sp_npi %>% map_chr(get_npi_standard_name),
  path_bp_name_clean = path_bp_npi %>% map_chr(get_npi_standard_name),
  
  anes_sp_name_clean = anes_sp_npi %>% map_chr(get_npi_standard_name),
  anes_bp_name_clean = anes_bp_npi %>% map_chr(get_npi_standard_name),
  
  faci_sp_name_clean = faci_sp_npi %>% map_chr(get_npi_standard_name),
  faci_bp_name_clean = faci_bp_npi %>% map_chr(get_npi_standard_name)
  )]

499

toe_nail_w_visit_btbv5 <- toe_nail_w_visit %>% 
  btbv5(
    osa_group_p=NA,
    osa_class_p = "Podiatrist",
    osa_specialization_p = NA
  ) %>% 
  .[,`:=`(procedure_type=23, 
          procedure_modifier="Standard", 
          ingest_date =Sys.Date())]
## [1] "multiple meet class req"
## [1] "RYAN  ELLSWORTH"  "KATHRYN C DECKER"
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "K2 FOOT AND ANKLE P (MURRAY)" "STANTON MILLER SMITH"        
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "DANIEL J HUFF"        "ANDREW HARRIS BURGON"
## [1] "multiple meet class req"
## [1] "DANIEL J HUFF"        "ANDREW HARRIS BURGON"
## [1] "multiple meet class req"
## [1] "K2 FOOT AND ANKLE P (MURRAY)" "STANTON MILLER SMITH"        
## [1] "multiple meet class req"
## [1] "DAVID H WARBY DPM (LAYTON)" "DAVID H WARBY"             
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "DANIEL J HUFF"        "ANDREW HARRIS BURGON"
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "DAVID  JARAMILLO"      "TODD JOSEPH JARAMILLO"
## [1] "multiple meet class req"
## [1] "SCOTT STEVEN SHELTON" "WADE A CHRISTIANSEN" 
## [1] "multiple meet class req"
## [1] "JESSE RILEY DPM  (PAYSON)" "JESSE ELLSWORTH RILEY"    
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "L CRAIG LARSEN DPM  (MURRAY)" "CLARK C LARSEN"              
## [1] "multiple meet class req"
## [1] "L CRAIG LARSEN DPM  (MURRAY)" "CLARK C LARSEN"              
## [1] "multiple meet class req"
## [1] "SCRODCO P (SOUTHWEST FOOT & ANKLE)" "RYAN THOMAS PETERSON"              
## [1] "multiple meet class req"
## [1] "L CRAIG LARSEN DPM  (MURRAY)" "CLARK C LARSEN"              
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "L CRAIG LARSEN DPM  (MURRAY)" "CLARK C LARSEN"              
## [1] "multiple meet class req"
## [1] "DAVID H WARBY DPM (LAYTON)" "DAVID H WARBY"             
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "JEFFREY LEE STEWART"                  
## [1] "multiple meet class req"
## [1] "DAVID H WARBY DPM (LAYTON)" "DAVID H WARBY"             
## [1] "multiple meet class req"
## [1] "DAVID H WARBY DPM (LAYTON)" "DAVID H WARBY"             
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "DANIEL J HUFF"        "ANDREW HARRIS BURGON"
## [1] "multiple meet class req"
## [1] "DAVID H WARBY DPM (LAYTON)" "DAVID H WARBY"             
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "L CRAIG LARSEN DPM  (MURRAY)" "CLARK C LARSEN"              
## [1] "multiple meet class req"
## [1] "DR BRIAN RICHMAN  (LAYTON)" "BRIAN H RICHMAN"           
## [1] "multiple meet class req"
## [1] "DAVID  JARAMILLO"      "TODD JOSEPH JARAMILLO"
## [1] "multiple meet class req"
## [1] "K2 FOOT AND ANKLE P (MURRAY)" "STANTON MILLER SMITH"        
## [1] "multiple meet class req"
## [1] "DANIEL J HUFF"        "ANDREW HARRIS BURGON"
## [1] "multiple meet class req"
## [1] "ANDREW H BURGON PODIATRY  (SUMMIT FOOT AND ANKLE)"
## [2] "ANDREW HARRIS BURGON"                             
## [1] "multiple meet class req"
## [1] "RYAN  ELLSWORTH"  "KATHRYN C DECKER"
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "SCRODCO P (SOUTHWEST FOOT & ANKLE)" "RYAN THOMAS PETERSON"              
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "RYAN  ELLSWORTH"  "KATHRYN C DECKER"
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"
toe_nail_w_visit_btbv5$tp_med_med %>% summary()
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##     1.0   311.6   352.3   382.9   417.4  1165.4
toe_q1 <- toe_nail_w_visit_btbv5$tp_med_med %>% quantile(.25)
toe_q3 <- toe_nail_w_visit_btbv5$tp_med_med %>% quantile(.75)
toe_iqr <- toe_nail_w_visit_btbv5$tp_med_med %>% IQR()
toe_nail_w_visit_btbv5_final <- toe_nail_w_visit_btbv5[tp_med_med >toe_q1 -1.5*toe_iqr & tp_med_med < toe_q3 + 1.5*toe_iqr ]
toe_nail_w_visit_btbv5$tp_med_med %>% summary()
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##     1.0   311.6   352.3   382.9   417.4  1165.4
toe_nail_w_visit_btbv5_final$tp_med_med %>% summary()
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##   196.6   310.8   350.0   361.7   396.5   575.0
bq_table_upload(x=procedure_dev_table, values= toe_nail_w_visit_btbv5_final, create_disposition='CREATE_IF_NEEDED', write_disposition='WRITE_APPEND')

##toe_nail_n_visit

toe_nail_n_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_n_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 98 x 2
##    name                 correlation
##    <chr>                      <dbl>
##  1 surg_bun_t_dev            0.157 
##  2 surg_bun_t_device         0.157 
##  3 path_bun_t_dna            0.157 
##  4 path_bun_t_gonorr         0.157 
##  5 path_bun_t_pregnancy      0.157 
##  6 path_bun_t_urine          0.157 
##  7 medi_bun_t_psych          0.128 
##  8 surg_bun_t_insert         0.108 
##  9 surg_bun_t_incision       0.0951
## 10 surg_bun_t_toe            0.0951
## # ... with 88 more rows
# toe_nail_n_visit %>% get_tag_density_information("surg_bun_t_dev") %>% print()
# only one observation
toe_nail_n_visit <- toe_nail_n_visit[surg_bun_t_dev==F]
toe_nail_n_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_n_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 92 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 medi_bun_t_psych             0.130 
##  2 surg_bun_t_incision          0.0965
##  3 surg_bun_t_toe               0.0965
##  4 medi_bun_t_boot              0.0959
##  5 surg_bun_t_endo              0.0628
##  6 surg_bun_t_tendon            0.0628
##  7 surg_bun_t_shave             0.0545
##  8 surg_bun_t_plate             0.052 
##  9 surg_bun_t_interlaminar      0.0519
## 10 surg_bun_t_lamina            0.0519
## # ... with 82 more rows
# toe_nail_n_visit %>% get_tag_density_information("medi_bun_t_psych") %>% print()
# only one oberservation
toe_nail_n_visit <- toe_nail_n_visit[medi_bun_t_psych==F]
toe_nail_n_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_n_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 91 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 surg_bun_t_incision          0.0974
##  2 surg_bun_t_toe               0.0974
##  3 medi_bun_t_boot              0.097 
##  4 surg_bun_t_endo              0.0635
##  5 surg_bun_t_tendon            0.0635
##  6 surg_bun_t_shave             0.055 
##  7 surg_bun_t_plate             0.0527
##  8 surg_bun_t_interlaminar      0.0524
##  9 surg_bun_t_lamina            0.0524
## 10 surg_bun_t_njx               0.0524
## # ... with 81 more rows
toe_nail_n_visit %>% get_tag_density_information("surg_bun_t_endo") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ surg_bun_t_endo"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 46.6
## $dist_plots

## 
## $stat_tables

toe_nail_n_visit <- toe_nail_n_visit[surg_bun_t_endo==F]
toe_nail_n_visit %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_n_visit %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 84 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 medi_bun_t_boot              0.098 
##  2 surg_bun_t_shave             0.0554
##  3 surg_bun_t_plate             0.0533
##  4 surg_bun_t_interlaminar      0.0528
##  5 surg_bun_t_lamina            0.0528
##  6 surg_bun_t_njx               0.0528
##  7 radi_bun_t_mammo             0.0483
##  8 surg_bun_t_b9                0.0471
##  9 surg_bun_t_exc               0.0465
## 10 surg_bun_t_other             0.046 
## # ... with 74 more rows
cols_to_check <-  toe_nail_n_visit %>% select_if(is.logical)
tag_frequency <- apply(cols_to_check, 2, function(i) sum(i > 0)) %>% enframe() %>% as.data.table() %>% .[,.(tag=name, freq=value)]
outlier_tag_list <- tag_frequency[freq < 2] %>% .[["tag"]]
toe_nail_n_visit_clean <- remove_bun_proc_with_rare_tags(outlier_tag_list=outlier_tag_list, df=toe_nail_n_visit)
## [1] "Start of rare tag removal"
## [1] "nrow:2010 , ncol:366"
## [1] "nrow:2010"
## [1] "removing: surg_bun_t_abscess"
## [1] 2009
## [1] "removing: surg_bun_t_amput"
## [1] 2009
## [1] "removing: surg_bun_t_ankle"
## [1] 2009
## [1] "removing: surg_bun_t_art"
## [1] 2009
## [1] "removing: surg_bun_t_arthro"
## [1] 2009
## [1] "removing: surg_bun_t_arthroscopy"
## [1] 2009
## [1] "removing: surg_bun_t_biopsy"
## [1] 2009
## [1] "removing: surg_bun_t_body"
## [1] 2009
## [1] "removing: surg_bun_t_bone"
## [1] 2009
## [1] "removing: surg_bun_t_compression"
## [1] 2009
## [1] "removing: surg_bun_t_correct"
## [1] 2009
## [1] "removing: surg_bun_t_cyst"
## [1] 2009
## [1] "removing: surg_bun_t_debrid"
## [1] 2009
## [1] "removing: surg_bun_t_debride"
## [1] 2009
## [1] "removing: surg_bun_t_decompression"
## [1] 2009
## [1] "removing: surg_bun_t_deformity"
## [1] 2009
## [1] "removing: surg_bun_t_dev"
## [1] 2009
## [1] "removing: surg_bun_t_device"
## [1] 2009
## [1] "removing: surg_bun_t_diagnostic"
## [1] 2009
## [1] "removing: surg_bun_t_dislocat"
## [1] 2009
## [1] "removing: surg_bun_t_drug"
## [1] 2009
## [1] "removing: surg_bun_t_duct"
## [1] 2009
## [1] "removing: surg_bun_t_dura"
## [1] 2009
## [1] "removing: surg_bun_t_eardrum"
## [1] 2008
## [1] "removing: surg_bun_t_egd"
## [1] 2008
## [1] "removing: surg_bun_t_endo"
## [1] 2008
## [1] "removing: surg_bun_t_endoscopy"
## [1] 2008
## [1] "removing: surg_bun_t_excision"
## [1] 2008
## [1] "removing: surg_bun_t_eye"
## [1] 2008
## [1] "removing: surg_bun_t_face"
## [1] 2007
## [1] "removing: surg_bun_t_fascia"
## [1] 2007
## [1] "removing: surg_bun_t_finger"
## [1] 2007
## [1] "removing: surg_bun_t_foot"
## [1] 2006
## [1] "removing: surg_bun_t_foreign"
## [1] 2006
## [1] "removing: surg_bun_t_fracture"
## [1] 2006
## [1] "removing: surg_bun_t_fusion"
## [1] 2006
## [1] "removing: surg_bun_t_graft"
## [1] 2006
## [1] "removing: surg_bun_t_hallux"
## [1] 2006
## [1] "removing: surg_bun_t_hand"
## [1] 2006
## [1] "removing: surg_bun_t_implant"
## [1] 2006
## [1] "removing: surg_bun_t_incision"
## [1] 2006
## [1] "removing: surg_bun_t_insert"
## [1] 2006
## [1] "removing: surg_bun_t_interlaminar"
## [1] 2005
## [1] "removing: surg_bun_t_knee"
## [1] 2005
## [1] "removing: surg_bun_t_lamina"
## [1] 2005
## [1] "removing: surg_bun_t_leg"
## [1] 2005
## [1] "removing: surg_bun_t_ligament"
## [1] 2005
## [1] "removing: surg_bun_t_lower"
## [1] 2005
## [1] "removing: surg_bun_t_nasal"
## [1] 2005
## [1] "removing: surg_bun_t_nerve"
## [1] 2005
## [1] "removing: surg_bun_t_njx"
## [1] 2005
## [1] "removing: surg_bun_t_open"
## [1] 2005
## [1] "removing: surg_bun_t_opening"
## [1] 2005
## [1] "removing: surg_bun_t_paravert"
## [1] 2005
## [1] "removing: surg_bun_t_part"
## [1] 2005
## [1] "removing: surg_bun_t_partial"
## [1] 2005
## [1] "removing: surg_bun_t_release"
## [1] 2005
## [1] "removing: surg_bun_t_repair"
## [1] 2005
## [1] "removing: surg_bun_t_resect"
## [1] 2005
## [1] "removing: surg_bun_t_revise"
## [1] 2005
## [1] "removing: surg_bun_t_revision"
## [1] 2005
## [1] "removing: surg_bun_t_shave"
## [1] 2004
## [1] "removing: surg_bun_t_sheath"
## [1] 2004
## [1] "removing: surg_bun_t_sperm"
## [1] 2004
## [1] "removing: surg_bun_t_sub"
## [1] 2004
## [1] "removing: surg_bun_t_tendon"
## [1] 2004
## [1] "removing: surg_bun_t_thumb"
## [1] 2004
## [1] "removing: surg_bun_t_tip"
## [1] 2004
## [1] "removing: surg_bun_t_tiss"
## [1] 2004
## [1] "removing: surg_bun_t_toe"
## [1] 2004
## [1] "removing: surg_bun_t_treat"
## [1] 2004
## [1] "removing: surg_bun_t_tum"
## [1] 2004
## [1] "removing: surg_bun_t_unit"
## [1] 2004
## [1] "removing: surg_bun_t_valgus"
## [1] 2004
## [1] "removing: surg_bun_t_wrist"
## [1] 2004
## [1] "removing: medi_bun_t_add-on"
## [1] 2004
## [1] "removing: medi_bun_t_analy"
## [1] 2004
## [1] "removing: medi_bun_t_choline"
## [1] 2004
## [1] "removing: medi_bun_t_clinic"
## [1] 2003
## [1] "removing: medi_bun_t_depression"
## [1] 2003
## [1] "removing: medi_bun_t_establish"
## [1] 2003
## [1] "removing: medi_bun_t_evaluat"
## [1] 2003
## [1] "removing: medi_bun_t_exercise"
## [1] 2003
## [1] "removing: medi_bun_t_hearing"
## [1] 2003
## [1] "removing: medi_bun_t_hpv"
## [1] 2003
## [1] "removing: medi_bun_t_hydrate"
## [1] 2003
## [1] "removing: medi_bun_t_immune"
## [1] 2003
## [1] "removing: medi_bun_t_laiv4"
## [1] 2003
## [1] "removing: medi_bun_t_medroxyprogesterone"
## [1] 2003
## [1] "removing: medi_bun_t_methylprednisolone"
## [1] 2003
## [1] "removing: medi_bun_t_oral"
## [1] 2003
## [1] "removing: medi_bun_t_outpt"
## [1] 2003
## [1] "removing: medi_bun_t_prednisolone"
## [1] 2003
## [1] "removing: medi_bun_t_progesterone"
## [1] 2003
## [1] "removing: medi_bun_t_psych"
## [1] 2003
## [1] "removing: medi_bun_t_reeducation"
## [1] 2003
## [1] "removing: medi_bun_t_services"
## [1] 2003
## [1] "removing: medi_bun_t_solution"
## [1] 2003
## [1] "removing: medi_bun_t_sound"
## [1] 2003
## [1] "removing: medi_bun_t_stud"
## [1] 2003
## [1] "removing: medi_bun_t_test"
## [1] 2002
## [1] "removing: medi_bun_t_testosterone"
## [1] 2002
## [1] "removing: medi_bun_t_therapeutic"
## [1] 2001
## [1] "removing: medi_bun_t_tracing"
## [1] 2001
## [1] "removing: medi_bun_t_traction"
## [1] 2001
## [1] "removing: medi_bun_t_ultrasound"
## [1] 2001
## [1] "removing: medi_bun_t_whirlpool"
## [1] 2001
## [1] "removing: medi_bun_t_wound"
## [1] 2001
## [1] "removing: medi_bun_t_hepa"
## [1] 2001
## [1] "removing: medi_bun_t_psytx"
## [1] 2001
## [1] "removing: medi_bun_t_pcv13"
## [1] 2000
## [1] "removing: medi_bun_t_eye_exam"
## [1] 2000
## [1] "removing: medi_bun_t_menacwy"
## [1] 2000
## [1] "removing: radi_bun_t_ankle"
## [1] 2000
## [1] "removing: radi_bun_t_bone"
## [1] 2000
## [1] "removing: radi_bun_t_breast"
## [1] 2000
## [1] "removing: radi_bun_t_chest"
## [1] 2000
## [1] "removing: radi_bun_t_ct"
## [1] 2000
## [1] "removing: radi_bun_t_echo"
## [1] 2000
## [1] "removing: radi_bun_t_exam"
## [1] 2000
## [1] "removing: radi_bun_t_finger"
## [1] 2000
## [1] "removing: radi_bun_t_fluoroscopy"
## [1] 2000
## [1] "removing: radi_bun_t_foot"
## [1] 2000
## [1] "removing: radi_bun_t_guide"
## [1] 2000
## [1] "removing: radi_bun_t_hand"
## [1] 2000
## [1] "removing: radi_bun_t_head"
## [1] 2000
## [1] "removing: radi_bun_t_joint"
## [1] 2000
## [1] "removing: radi_bun_t_lumbar"
## [1] 2000
## [1] "removing: radi_bun_t_mammo"
## [1] 1999
## [1] "removing: radi_bun_t_mri"
## [1] 1999
## [1] "removing: radi_bun_t_neck"
## [1] 1999
## [1] "removing: radi_bun_t_pelvi"
## [1] 1999
## [1] "removing: radi_bun_t_shoulder"
## [1] 1999
## [1] "removing: radi_bun_t_spine"
## [1] 1999
## [1] "removing: radi_bun_t_thorac"
## [1] 1999
## [1] "removing: radi_bun_t_toe"
## [1] 1999
## [1] "removing: radi_bun_t_view"
## [1] 1999
## [1] "removing: radi_bun_t_wrist"
## [1] 1999
## [1] "removing: radi_bun_t_without_dye"
## [1] 1999
## [1] "removing: radi_bun_t_x-ray"
## [1] 1999
## [1] "removing: path_bun_t_acid"
## [1] 1998
## [1] "removing: path_bun_t_agent"
## [1] 1998
## [1] "removing: path_bun_t_anti"
## [1] 1998
## [1] "removing: path_bun_t_antibod"
## [1] 1998
## [1] "removing: path_bun_t_bact"
## [1] 1998
## [1] "removing: path_bun_t_bacteria"
## [1] 1998
## [1] "removing: path_bun_t_blood"
## [1] 1998
## [1] "removing: path_bun_t_colon"
## [1] 1998
## [1] "removing: path_bun_t_count"
## [1] 1997
## [1] "removing: path_bun_t_cpk"
## [1] 1997
## [1] "removing: path_bun_t_creatinine"
## [1] 1997
## [1] "removing: path_bun_t_cytopath"
## [1] 1997
## [1] "removing: path_bun_t_detect"
## [1] 1997
## [1] "removing: path_bun_t_dna"
## [1] 1997
## [1] "removing: path_bun_t_drug"
## [1] 1997
## [1] "removing: path_bun_t_enzyme"
## [1] 1996
## [1] "removing: path_bun_t_factor"
## [1] 1996
## [1] "removing: path_bun_t_fecal"
## [1] 1996
## [1] "removing: path_bun_t_ferritin"
## [1] 1996
## [1] "removing: path_bun_t_fluid"
## [1] 1996
## [1] "removing: path_bun_t_free"
## [1] 1996
## [1] "removing: path_bun_t_function"
## [1] 1996
## [1] "removing: path_bun_t_gene"
## [1] 1995
## [1] "removing: path_bun_t_general"
## [1] 1995
## [1] "removing: path_bun_t_giardia"
## [1] 1995
## [1] "removing: path_bun_t_glucose"
## [1] 1995
## [1] "removing: path_bun_t_gonorr"
## [1] 1995
## [1] "removing: path_bun_t_health"
## [1] 1995
## [1] "removing: path_bun_t_hep"
## [1] 1995
## [1] "removing: path_bun_t_hepati"
## [1] 1995
## [1] "removing: path_bun_t_hiv"
## [1] 1994
## [1] "removing: path_bun_t_hormone"
## [1] 1993
## [1] "removing: path_bun_t_immunohisto"
## [1] 1993
## [1] "removing: path_bun_t_iron"
## [1] 1993
## [1] "removing: path_bun_t_lipid"
## [1] 1993
## [1] "removing: path_bun_t_lipoprotein"
## [1] 1993
## [1] "removing: path_bun_t_magnesium"
## [1] 1993
## [1] "removing: path_bun_t_patho"
## [1] 1993
## [1] "removing: path_bun_t_pathologist"
## [1] 1993
## [1] "removing: path_bun_t_phosphorus"
## [1] 1993
## [1] "removing: path_bun_t_potassium"
## [1] 1993
## [1] "removing: path_bun_t_pregnancy"
## [1] 1993
## [1] "removing: path_bun_t_progesterone"
## [1] 1993
## [1] "removing: path_bun_t_protein"
## [1] 1993
## [1] "removing: path_bun_t_psa"
## [1] 1993
## [1] "removing: path_bun_t_quantitative"
## [1] 1993
## [1] "removing: path_bun_t_renal"
## [1] 1993
## [1] "removing: path_bun_t_sex"
## [1] 1993
## [1] "removing: path_bun_t_smear"
## [1] 1993
## [1] "removing: path_bun_t_strep"
## [1] 1992
## [1] "removing: path_bun_t_testosterone"
## [1] 1992
## [1] "removing: path_bun_t_thyroid"
## [1] 1992
## [1] "removing: path_bun_t_time"
## [1] 1992
## [1] "removing: path_bun_t_tissue"
## [1] 1992
## [1] "removing: path_bun_t_urinalysis"
## [1] 1992
## [1] "removing: path_bun_t_urine"
## [1] 1992
## [1] "removing: path_bun_t_virus"
## [1] 1992
## [1] "removing: path_bun_t_vitamin"
## [1] 1992
## [1] "removing: path_bun_t_without_scope"
## [1] 1992
## [1] "removing: anes_bun_t_anes"
## [1] 1992
## [1] "removing: anes_bun_t_anesth"
## [1] 1992
## [1] "removing: anes_bun_t_bone"
## [1] 1992
## [1] "removing: anes_bun_t_knee"
## [1] 1992
## [1] "removing: anes_bun_t_leg"
## [1] 1992
## [1] "removing: anes_bun_t_lower"
## [1] 1992
## [1] "removing: anes_bun_t_nose"
## [1] 1992
## [1] "removing: anes_bun_t_sinus"
## [1] 1992
## [1] "removing: anes_bun_t_surg"
## [1] 1992
## [1] "removing: faci_bun_t_dept"
## [1] 1992
## [1] "removing: faci_bun_t_emergency"
## [1] 1992
## [1] "removing: faci_bun_t_est"
## [1] 1992
## [1] "removing: faci_bun_t_follow-up"
## [1] 1992
## [1] "removing: faci_bun_t_handling"
## [1] 1991
## [1] "removing: faci_bun_t_lab"
## [1] 1991
## [1] "removing: faci_bun_t_office"
## [1] 1991
## [1] "removing: faci_bun_t_pat"
## [1] 1991
## [1] "removing: faci_bun_t_postop"
## [1] 1991
## [1] "removing: faci_bun_t_specimen"
## [1] 1991
## [1] "removing: faci_bun_t_visit"
## [1] 1991
toe_nail_n_visit_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_n_visit_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 50 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 medi_bun_t_boot              0.0995
##  2 surg_bun_t_other             0.0466
##  3 surg_bun_t_plate             0.0403
##  4 medi_bun_t_visit             0.0398
##  5 medi_bun_t_immunization      0.0368
##  6 medi_bun_t_immun             0.0356
##  7 surg_bun_t_b9                0.0342
##  8 path_bun_t_hemoglobin        0.0331
##  9 medi_bun_t_vacc              0.0301
## 10 medi_bun_t_iiv               0.0276
## # ... with 40 more rows
toe_nail_n_visit_clean %>% get_tag_density_information("medi_bun_t_boot") %>% print()
## Scale for 'y' is already present. Adding another scale for 'y', which will
## replace the existing scale.
## Scale for 'x' is already present. Adding another scale for 'x', which will
## replace the existing scale.
## [1] "tp_med ~ medi_bun_t_boot"
## Warning in leveneTest.default(y = y, group = group, ...): group coerced to
## factor.
## Picking joint bandwidth of 46.2
## $dist_plots

## 
## $stat_tables

toe_nail_n_visit_clean <- toe_nail_n_visit_clean[medi_bun_t_boot == F]
toe_nail_n_visit_clean %>% plot_med_density() %>% print()
## `stat_bin()` using `bins = 30`. Pick better value with `binwidth`.

toe_nail_n_visit_clean %>% get_tag_cor() %>% print()
## Warning in stats::cor(cor_data): the standard deviation is zero
## # A tibble: 49 x 2
##    name                    correlation
##    <chr>                         <dbl>
##  1 surg_bun_t_other             0.0477
##  2 surg_bun_t_plate             0.0416
##  3 medi_bun_t_visit             0.04  
##  4 medi_bun_t_immunization      0.0385
##  5 medi_bun_t_immun             0.0373
##  6 surg_bun_t_b9                0.0355
##  7 path_bun_t_hemoglobin        0.0338
##  8 medi_bun_t_vacc              0.0318
##  9 medi_bun_t_iiv               0.029 
## 10 surg_bun_t_lesion            0.0261
## # ... with 39 more rows
toe_nail_n_visit_clean <- toe_nail_n_visit_clean[,`:=`(
  surg_sp_name_clean = surg_sp_npi %>% map_chr(get_npi_standard_name),
  surg_bp_name_clean = surg_bp_npi %>% map_chr(get_npi_standard_name),
  
  medi_sp_name_clean = medi_sp_npi %>% map_chr(get_npi_standard_name),
  medi_bp_name_clean = medi_bp_npi %>% map_chr(get_npi_standard_name),
  
  radi_sp_name_clean = radi_sp_npi %>% map_chr(get_npi_standard_name),
  radi_bp_name_clean = radi_bp_npi %>% map_chr(get_npi_standard_name),
  
  path_sp_name_clean = path_sp_npi %>% map_chr(get_npi_standard_name),
  path_bp_name_clean = path_bp_npi %>% map_chr(get_npi_standard_name),
  
  anes_sp_name_clean = anes_sp_npi %>% map_chr(get_npi_standard_name),
  anes_bp_name_clean = anes_bp_npi %>% map_chr(get_npi_standard_name),
  
  faci_sp_name_clean = faci_sp_npi %>% map_chr(get_npi_standard_name),
  faci_bp_name_clean = faci_bp_npi %>% map_chr(get_npi_standard_name)
  )]

499

toe_nail_n_visit_clean_btbv5 <- toe_nail_n_visit_clean %>% 
  btbv5(
    osa_group_p=NA,
    osa_class_p = "Podiatrist",
    osa_specialization_p = NA
  ) %>% 
  .[,`:=`(procedure_type=23, 
          procedure_modifier="No Visit", 
          ingest_date =Sys.Date())]
## [1] "multiple meet class req"
## [1] "DR BRIAN RICHMAN  (LAYTON)" "BRIAN H RICHMAN"           
## [1] "multiple meet class req"
## [1] "SCRODCO P (SOUTHWEST FOOT & ANKLE)" "DAVID T MAGNESEN"                  
## [1] "multiple meet class req"
## [1] "DR BRIAN RICHMAN  (LAYTON)" "BRIAN H RICHMAN"           
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "SCRODCO P (SOUTHWEST FOOT & ANKLE)" "RYAN THOMAS PETERSON"              
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "NATHAN W DAVIS DPM  (MURRAY)" "NATHAN W DAVIS"              
## [1] "multiple meet class req"
## [1] "DR BRIAN RICHMAN  (LAYTON)" "BRIAN H RICHMAN"           
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "SCRODCO P (SOUTHWEST FOOT & ANKLE)" "DAVID T MAGNESEN"                  
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "JEFFREY LEE STEWART"                  
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "JEFFREY LEE STEWART"                  
## [1] "multiple meet class req"
## [1] "DONALD R CALL JR DPM  (SOUTH JORDAN)"
## [2] "DONALD R CALL"                       
## [1] "multiple meet class req"
## [1] "L CRAIG LARSEN DPM  (MURRAY)" "CLARK C LARSEN"              
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "DR BRIAN RICHMAN  (LAYTON)" "BRIAN H RICHMAN"           
## [1] "multiple meet class req"
## [1] "L CRAIG LARSEN DPM  (MURRAY)" "CLARK C LARSEN"              
## [1] "multiple meet class req"
## [1] "DR BRIAN RICHMAN  (LAYTON)" "BRIAN H RICHMAN"           
## [1] "multiple meet class req"
## [1] "CANYON FOOT AND ANKLE  (SPANISH FORK)"
## [2] "LEVI J BERRY"                         
## [1] "multiple meet class req"
## [1] "ANDREW H BURGON PODIATRY  (SUMMIT FOOT AND ANKLE)"
## [2] "ANDREW HARRIS BURGON"                             
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "DR BRIAN RICHMAN  (LAYTON)" "BRIAN H RICHMAN"           
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "DR BRIAN RICHMAN  (LAYTON)" "BRIAN H RICHMAN"           
## [1] "multiple meet class req"
## [1] "K2 FOOT AND ANKLE P (MURRAY)" "STANTON MILLER SMITH"        
## [1] "multiple meet class req"
## [1] "DAVID H WARBY DPM (LAYTON)" "DAVID H WARBY"             
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "JEFFREY LEE STEWART"                  
## [1] "multiple meet class req"
## [1] "D ALDEN YATES DPM  (ST GEORGE)" "DON A YATES"                   
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "CORAL DESERT FOOT  ANKLE  (ST GEORGE)"
## [2] "LANDON  CAMERON"                      
## [1] "multiple meet class req"
## [1] "K2 FOOT AND ANKLE P (MURRAY)" "STANTON MILLER SMITH"
toe_nail_n_visit_clean_btbv5$tp_med_med %>% summary()
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##     0.0   204.7   221.9   254.8   279.6  1599.9
toe_q1 <- toe_nail_n_visit_clean_btbv5$tp_med_med %>% quantile(.25)
toe_q3 <- toe_nail_n_visit_clean_btbv5$tp_med_med %>% quantile(.75)
toe_iqr <- toe_nail_n_visit_clean_btbv5$tp_med_med %>% IQR()
toe_nail_n_visit_clean_btbv5_final <- toe_nail_n_visit_clean_btbv5[tp_med_med >toe_q1 -1.5*toe_iqr & tp_med_med < toe_q3 + 1.5*toe_iqr ]
toe_nail_n_visit_clean_btbv5$tp_med_med %>% summary()
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##     0.0   204.7   221.9   254.8   279.6  1599.9
toe_nail_n_visit_clean_btbv5_final$tp_med_med %>% summary()
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##   106.0   204.7   221.3   237.2   272.8   383.0
bq_table_upload(x=procedure_dev_table, values= toe_nail_n_visit_clean_btbv5_final, create_disposition='CREATE_IF_NEEDED', write_disposition='WRITE_APPEND')